Galaxy Europe News

news

This page contains announcements of interest to the Galaxy Community. These include items from the Galaxy Team or the Galaxy community and address anything that is of wide interest to the community.

Also see the Galactic Blog for more.

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18 November 2024	Massive open online education party: The Galaxy Training Academy	In October 2024, the Galaxy Training Network (GTN) was running a global Galaxy online course
16 November 2024	Galaxy Docker Image Update: Version 24.1 Released!	Discover Galaxy Docker 24.1 with updated services, streamlined architecture, and new features.
15 November 2024	MGnify amplicon pipeline v5.0 on Galaxy	Porting the MGnify Amplicon Pipeline v5.0 to Galaxy: A Collaborative Effort with EBI
15 November 2024	Training Infrastructure Feedback from Hans-Rudolf Hotz and Lucille Delisle	We were super happy to stand in front of a group of highly motivated people to teach them galaxy and workflows.
8 November 2024	Report from the Helmholtz Metadata Collaboration Conference (HMC) 2024	Galaxy imaging and RDM workflows were presented at the HMC 2024
30 October 2024	Engaging, Learning, and Sharing at the German Conference of Bioinformatics 2024 with the Galaxy Team!	A recap of our Galaxy team's experience at GCB 2024, featuring insightful talks, interactive poster sessions, hands-on workshops, and memorable social events!
30 October 2024	Galaxy in Research: Microbial life at Arctic hydrothermal vents	How do hydrothermal vents at the bottom of the Arctic Ocean fuel microbial life? A new study explores the microbial ecosystems thriving at the Aurora and Polaris seamounts, revealing key insights into how hydrogen and sulfur power deep-sea life.
25 October 2024	Announcing the GBCC2025 Logo Design Contest!	Unleash your creativity for the first-ever Galaxy & Bioconductor Community Conference!
10 October 2024	Freiburg Galaxy team at the EGI 2024	Members from the Freiburg Galaxy team traveled to Lecce, Italy to participate and present the EuroScienceGateway (ESG) project at the EGI2024 meeting from 1st-3rd October.
9 October 2024	Expanding the Galaxy platform to materials science workflows at STFC	New Opportunities for Better User Group Software (NOBUGS 2024)
1 October 2024	Galaxy in Research: New insights into antibody activation using AlphaFold in Galaxy	How do antigens trigger B-cell receptors (BCRs), and can a single mechanism explain the activation of all BCR types? This study explores a unifying model that integrates various mechanisms of BCR triggering, providing fresh perspectives on antibody activation.
24 September 2024	Galaxy Newsletter: September 2024	Discover exciting updates, including the Galaxy Training Academy 2024, ColabFold's arrival on Galaxy, GBCC2025, and major community milestones!
23 September 2024	100,000 users for Galaxy-EU	We are thrilled to announce, that UseGalaxy.EU has reached 100,000 users!
21 September 2024	European Galaxy Team Presents at scverse Conference 2024	Learn more about the scverse conference 2024
20 September 2024	We are striking!	usegalaxy.eu closes job-queue on September 20th to support climate strike
20 September 2024	Bring Your Own Storage with Galaxy	Connect Galaxy with external storage resources easily
19 September 2024	The ERGA Assembly Report - a community-developed Genome Assembly QC Document Using Galaxy	Discover more about the ERGA Assembly Report – a comprehensive, community-driven Genome assembly Quality Control Document.
16 September 2024	Viral pathogen data analysis beyond BY-COVID	A look back at the BY-COVID project and ahead to upcoming developments
5 September 2024	Galaxy in Research: Uncovering the evolutionary secrets of wild loquats using comparative chloroplast genomics	A new study has sequenced and analyzed two wild loquat chloroplast genomes, revealing key insights into their evolutionary history and the genetic diversity of loquat species.
2 September 2024	Using Large Language Models in complex workflows	Use ChatGPT in your analysis on the Galaxy Server to leverage the Large Language Model in your automated workflows
26 August 2024	Registration for the Galaxy Training Academy 2024	Join us at the Galaxy Training Academy 2024. Learn all about data analysis with Galaxy, for all levels. Registration is open now!
21 August 2024	Hosting R/Shiny applications on Galaxy (and other frameworks)	Thanks to the outcome of a small Galaxy/Bioconductor hackathon earlier this year, it has become much easier to deploy Shiny applications as interactive tools (ITs) on usegalaxy.eu
20 August 2024	Opinion: Conda, Anaconda and the much bigger problem behind it	Anaconda, DockerHub, Quay.io, GitHub ... we need to talk about the sustainability of our infrastructure.
19 August 2024	Galaxy in Research: Advancing quantum materials research with Galaxy	At Oak Ridge National Laboratory, scientists have harnessed the power of Galaxy to bring together cutting-edge computing resources, paving the way for new discoveries in quantum materials through advanced neutron scattering data analysis.
16 August 2024	Sysadmin Curriculum Planning	Workshop on filling the sysadmin skills gap to support public health bioinformatics & genomic epidemiology in Africa
14 August 2024	Galaxy in Research: Exploring DNA methylation and aging across diverse human tissues	How does DNA methylation correlate with aging across different human tissues? A new study provides insights into this question, revealing tissue-specific and shared epigenetic patterns.
3 August 2024	WorkflowHub Publishers and Journal Forum	Meeting Summary from EuroScienceGateway's WorkflowHub Publishers and Journal Forum
30 July 2024	Galaxy in Research: Exploring Genetic Variability in Almond Blooming	Learn how genetic variations influence the blooming periods of almond cultivars, revealing key insights into their molecular regulation.
29 July 2024	The AquaINFRA Virtual Research Environment	Design rationale for using the Galaxy platform
29 July 2024	What do you want to know about Galaxy-EU? Our first "Ask us anything" Q&A session	Galaxy-EU had its first ask us anything live webinar
26 July 2024	Shiny phyloseq interactive tool available on usegalaxy.eu - practical outcome of the Bioconductor Hackathon	We are thrilled to announce, that thanks to the help of the Bioconductor community, we could deploy the Shiny phyloseq App as an interactive tool (IT) on usegalaxy.eu
26 July 2024	IRCCS AOUBO Hospital in Bologna leverages Galaxy Project for diagnosing rare diseases	The Galaxy Project has found its way into the practices of a leading medical institution in Bologna, Italy
24 July 2024	Galaxy Newsletter: July 2024	Tune in for exciting updates from GCC2024, the latest Galaxy release, and more in this edition of the Galaxy Newsletter!
19 July 2024	GCC2024 Meeting Report	Discover the highlights from GCC2024, where the Galaxy community gathered in Brno to share insights, innovations, and collaborations.
17 July 2024	Traefik Reverse Proxy for High Availablilty	A reverse proxy and loadbalancer for two headnode setup at Galaxy Europe
17 July 2024	Galaxy in Research: Unlocking genetic secrets of Lake Baikal’s endemic sponges	Explore the depths of Lake Baikal and discover how cutting-edge genetic research in Galaxy is unraveling the complex relationships between its unique sponge species.
11 July 2024	Enabling architectures that collect community-centric research software metadata	The ELIXIR Research Software Ecosystem (RSEc) and the Galaxy Codex make use of GitHub CI bots to collect research software metadata and provide a FAIR tool metadata repository for the global research community
8 July 2024	New Preprint: PathoGFAIR, a collection of FAIR and adaptable (meta)genomics workflows for (foodborne) pathogens detection and tracking
8 July 2024	Galaxy Social - Democratising Galaxy’s social media activity	A summary of what Galaxy Social is.
3 July 2024	Galaxy in Research: Molecular secrets of minnow adaptation to salinity stress	Discover how advanced transcriptomic analyses in Galaxy reveal the intricate molecular adaptations of minnows to freshwater salinization.
1 July 2024	Galaxy Community Conference 2024 - a brief summary from the Freiburg Galaxy Team!	A brief summary from the Freiburg Galaxy Team for GCC 2024
20 June 2024	Galaxy Release 24.1	See what's new on Galaxy with the 24.1 release notes!
20 June 2024	EOSC Coordination Meeting, Brussels, Belgium	The Horizon Europe EOSC project EuroScienceGateway attended the EOSC coordination meeting
11 June 2024	Applying the Galaxy platform to XAS use cases	The EuroScienceGateway (ESG)team, working in the UK to develop Galaxy tools for materials science presented a poster on Applying Galaxy platform to XAS use cases at the Diamond light source spectroscopy user group meeting 2024.
10 June 2024	The 2024 Galaxy Community Update Paper is Here!	Discover the latest advancements and future directions of the Galaxy Project in the community's newly published 2024 update paper.
5 June 2024	Galaxy in Research: Decoding chromatin interactions with asteRIa	Find out how Galaxy helps researchers unlock the mysteries of gene expression regulation through chromatin studies.
3 June 2024	UseGalaxy.eu Use Case: Translational Research and Precision Medicine
3 June 2024	Galaxy in Research: Investigating Food Safety Threats	Learn how Galaxy can be used to detect and analyze drug-resistant bacteria threatening food safety in Egypt.
3 June 2024	All GTN training data are now automatically mirrored via Onedata	As part of the EuroScienceGateway and in cooperation with Onedata and EGI we are providing all GTN training data on a publicly accessible cloud storage
29 May 2024	EGI Check-in now available as login option in UseGalaxy.eu	EuroScienceGateway project enables EGI users in UseGalaxy.eu
28 May 2024	Galaxy talks at NeIC 2024	Two talks about Galaxy, Meta-scheduling and the GTN at the NeIC 2024 - Nordic e-Infrastructure Collaboration Conference (Nordic e-Infrastructure Tomorrow)
28 May 2024	Develop and engage: Sustainable software tools for large-scale facilities using the Galaxy platform	Talk on Galaxy tools for muon experiments and catalysis research at the CECAM conference
27 May 2024	All GTN training data in one basket	Providing effortless access to GTN training data via Onedata
22 May 2024	Introducing GTN Event Pages	Are you organizing a training event using GTN materials? You can now add your event directly to the GTN!
20 May 2024	EuroScienceGateway project: Easy deployment of ARC endpoints with Infrastructure Manager	Deploy ARC endpoints in the EGI Federated Cloud easily with Infrastructure Manager
16 May 2024	UseGalaxy.eu Use Case: Profiling of Tregs in Coronary Artery Disease using RNAseq	A report out of Galaxy Europe's user space, by Sheu-Tijani Olawale Abogunloko
15 May 2024	Galaxy Release 24.0	Check out the newest features and updates on Galaxy!
15 May 2024	UseGalaxy.eu Use Case: cardiac regeneration in neonatal mice	A report out of Galaxy Europe's user space, by Mona Malek Mohammadi
15 May 2024	Open Galaxy Position at Galaxy Europe Team, University of Freiburg	Description
14 May 2024	Galaxy in Research: Exploring the Hidden World of Antarctic Toxins with Galaxy	Discover how Galaxy is helping to unravel the hidden world of peptide toxins in an Antarctic marine invertebrate.
13 May 2024	Perfectly FAIR Training!	We are happy to report that over the years of our fruitful collaboration with ELIXIR TeSS, all GTN materials should receive a perfect score on the FAIR-Checker.
13 May 2024	UseGalaxy.eu Use Case: RNA-directed DNA methylation (RdDM) in barley	A report out of Galaxy Europe's user space, by Fabio Miloro
3 May 2024	InvenioRDM integration in Galaxy	Discover a more streamlined approach to research data management with Galaxy's integration with InvenioRDM-compatible repositories.
2 May 2024	Transcriptomic Data Analysis Using the Galaxy Platform	An interesting book chapter presents an overview of a transcriptomics data analysis pipeline using Galaxy, specifically designed for studying gene expression in coffee flowers. This pipeline can be leveraged in genetic improvement programs, for instance, to combat climate change
30 April 2024	How to improve the annotation of Galaxy resources? Outcomes of an online hackathon for improving the annotation of Galaxy resources for microbial data resources	Find out how we improved the annotation of Galaxy tools and training material for microbiological data analysis!
28 April 2024	Poster highlight: Implementation of a reproducible pipeline for producing seasonal Arctic sea ice forecasts (Stoeckl et al. 2023)	We are thrilled to highlight the poster presentation by Vanessa Stoeckl at the European Geoscience Union (EGU) Conference 2024. "
25 April 2024	Using the Galaxy Platform in Large Scale Experiments	The EuroScienceGateway team, working in the UK to develop Galaxy tools for materials science, gave one of the latest webinars of the Physical Sciences Data Infrastructure (PSDI) project.
25 April 2024	Whisper: An open-source model for speech recognition now available in Galaxy!	Now use Whisper in the European Galaxy Server to recognize and transcribe your speech data🎙️!
24 April 2024	Open Galaxy Positions at Melbourne Bioinformatics	Melbourne Bioinformatics is expanding their team and recruiting three new roles to work on bioinformatics training, outreach, and research.
22 April 2024	pairtools: A simple and fast tool suite for processing sequencing data from a Hi-C experiment now in Galaxy!	Now use pairtools in the European Galaxy Server to process your Hi-C experiment data 🧑‍💻
18 April 2024	Talk by Alan Rubin in Freiburg	Bioinformatics club talk by Alan Rubin: Analyzing and Sharing Data from High-throughput Mutagenesis Experiments
15 April 2024	Tracegroomer: a solution to format and normalise metabolomics data for DIMet tool	Please welcome Tracegroomer - a new member of the Galaxy bookshelf
12 April 2024	An earth system case study at the EGU 2024	A Galaxy workflow presented during the European Geoscience Union
12 April 2024	Annual Report 2023 of the Freiburg Galaxy Team	Report about activities and achievements
28 March 2024	Learn to use MINERVA Platform’s COVID-19 Disease Map with Galaxy	As part of the work of BeYond COVID, we have developed a new integration between the MINERVA Platform’s COVID-19 Disease Map and Galaxy! Datasets created within Galaxy can now be seamlessly visualized in the MINERVA Platform, allowing you to explore your data in the context of the COVID-19 Disease Map.
26 March 2024	New Learning Pathway for FAIR Data Management developed by ELIXIR-UK Data Stewardship Fellows and Experts	ELIXIR-UK’s Data Stewardship Fellowship is excited to announce a new learning pathway focused on FAIR Data Management! This program equips researchers and research support staff with the skills to effectively manage their research data.
22 March 2024	BioNT Community Event: Open call for proposals	Are you interested in training and want to exchange and get to know other learning communities? BioNT, together with the Carpentries, is hosting a 3-day community event.
19 March 2024	James 'JJ' Johnson
19 March 2024	Galaxy Team Meeting in Austin, Texas	Check out what was accomplished when part of the Galaxy team got together in Austin, Texas, for a team meeting!
18 March 2024	Galaxy Newsletter: March 2024	Dive into the March 2024 Galaxy Newsletter!
18 March 2024	Cool URLs Don’t Change, GTN URLs don’t either.	At the Galaxy Training Network we are really committed to ensuring our training materials are Findable, Accessible, Interoperable, and Reusable
8 March 2024	Achievements during the 'Image Analysis in Galaxy' hackathon	Find out the new features that are now available for image analysts!
7 March 2024	NCBI Foreign Contamination Screen Tool: Now Available in Galaxy!	We are thrilled to have partnered with NCBI to include their Foreign Contamination Screen tool in Galaxy!
4 March 2024	Lost in a topic? Try a Learning Pathway!	We know the GTN has a lot of learning materials (400 and counting!) which can make it quite difficult to figure out where to start in some topics.
1 March 2024	CellProfiler now available in Galaxy as an interactive tool too	Use CellProfiler as if you were working in your local workstation
29 February 2024	GTN ❤️ GMOD	Building upon the work previously done for the SARS-Cov-2 Topic we have further expanded the ‘tag based topics’ to support a new GMOD topic.
29 February 2024	Initial EuroScienceGateway workflows published in WorkflowHub	Workflows covering astronomy, biodiversity, earth science and genomics published in WorkflowHub together with onboarding guide
28 February 2024	FOSDEM 2024: How Galaxy democratizes data analysis	Galaxy Europe at the Free and Open Source Developers’ European Meeting in Brussels 🍟
27 February 2024	Horizon Europe project EOSC EuroScienceGateway at EOSC Winter School 2024
26 February 2024	Molecular Biology of Plants conference (MBP 2024)	Poster Presentation entitled MAdLand Tools & Resources
26 February 2024	Napari: A fast, interactive, multi-dimensional image viewer on Galaxy!	Use Napari in the European Galaxy Server as an interactive tool
23 February 2024	DOMPS Plant Science Seminar	Seminar talk entitled MAdLand Resources & Tools presented by Deepti Varshney and Saskia Hiltemann
9 February 2024	PAG31 Meeting Report	Read about Galaxy's participation at PAG31.
7 February 2024	Galaxy Release 23.2	Workflow comments, InvenioRDM integration, improved search, admin and config updates and more!
6 February 2024	The start of OSCARS - an EOSC project	Galaxy Europe being part of the new 'Open Science Clusters' Action for Research & Society' (OSCARS)
4 February 2024	Satellite data for earth sciences	Jupyterlabs and Notebooks for earth, environment, and climate sciences
30 January 2024	[GTN news] GTN in Discourse
29 January 2024	[GTN news] Simplified GTN News submission via Google Form
26 January 2024	Galaxy is Leaving Twitter/X	Effective March 31st, 2024, Galaxy will be leaving Twitter/X.
24 January 2024	MAdLandDB: A Comprehensive Protein Database for Plant and Algal Genomes	Exploring MAdLandDB: Protein Sequences across diverse Organisms
17 January 2024	[GTN news] FAIR Data management in single cell analysis
15 January 2024	Graphical retrospectives of personal and community-wide contributions to Galaxy	Web-based tool to keep track of activities within the different Galaxy communities based on the Git histories of the relevant repositories on GitHub.
23 December 2023	Galaxy Single-cell Community: Year in Review	The Galaxy Single-cell Community provides a 2023 review!
22 December 2023	EuroScienceGateway Work Package 3: first year achievements
19 December 2023	Galaxy Newsletter: December 2023	Check out the December 2023 Galaxy Newsletter to learn about some of the highlights of 2023, take a look ahead into 2024, and read some of this year's top Galaxy Success Stories!
18 December 2023	[GTN news] User story: Where Galaxy meets medicinal chemistry
14 December 2023	Galaxy Europe has been added as a new ELIXIR RIR	usegalaxy.eu is now an ELIXIR Recommended Interoperability Resource!
12 December 2023	[GTN news] Tutorial Feature: Easier launching of WorkflowHub & Dockstore Workflows
29 November 2023	New Paper "Transformer-based tool recommendation system in Galaxy"
29 November 2023	Inference using a publicly available pre-trained AI model (BioModels) in Galaxy	Use a Galaxy tool for making prediction on test data using publicly available pre-trained AI model (BioModels) served via a Docker container
21 November 2023	[GTN news] Feedback: Easy slide recordings
21 November 2023	2nd BioNT Training workshop - From Hero to Zero with Python	BioNT delivered its second training workshop, From Hero to Zero with Python, from 21th to 24th of November, 2023. This post reports this workshop's organisation, and the backgound and feedback of its applicants and participants.
21 November 2023	[GTN news] GTN has left Twitter/X as of October
20 November 2023	[GTN news] Update: Workflow List now searches WorkflowHub.eu, advanced query syntax
14 November 2023	AquaINFRA - welcome to EuroScienceGateway	A new community AquaINFRA joins the WP5 of European Science Gateway project
14 November 2023	"Run on Galaxy" button in WorkflowHub	Find solutions and templates in WorkflowHub, immediately import to Galaxy on a click
8 November 2023	EuroScienceGateway project: new EGI Check-in and WLCG IAM backends available in python-social-auth	Python-social-auth release 4.5.0 includes two new backends contributed by EuroScienceGateway
31 October 2023	EuroScienceGateway project: Easy deployment of Pulsar endpoints with Infrastructure Manager	Deploy Pulsar endpoints in the EGI Federated Cloud easily with Infrastructure Manager
30 October 2023	bwHPC Symposium	Introducing Galaxy: A new cloud and HPC gateway for data-driven computational research
30 October 2023	ELIXIR Biohackathon in Barcelona
30 October 2023	An update on Galaxy Genome Annotation	Galaxy as a platform for the annotation of genomes
25 October 2023	Galaxy and workflows: advancing SARS-CoV-2 genomic surveillance in wastewater	Galaxy empowered research in SARS-CoV-2 surveillance in wastewater
18 October 2023	Ocean Data View : a new and first of it's kind tool for the Earth-System subdomain	Use Ocean Data View (ODV) in Galaxy Europe as an interactive tool
17 October 2023	A brand new subdomain of Galaxy Europe : earth-system.usegalaxy.eu	A subdomain to process, analyse and access Earth System and Environmental data
13 October 2023	The European Galaxy Days are over...	...but we look back with a relaxed smile. Let's draw the balance!
12 October 2023	Galaxy goes Research Data Infrastructure	The Galaxy Europe Team active at NFDI's CoRDI (Karlsruhe, Germany, Sep 12th to 14th)
12 October 2023	[GTN news] Single cell subdomain re-launch: Unified and feedback-driven
10 October 2023	EGI and EuroScienceGateway sign Service-Level Agreement	Elevating FAIR data analytics in EOSC: SLA between ESG and EGI; IISAS to bring in additional resources
6 October 2023	QGIS : A Geographical Information System on Galaxy !	Use QGIS in Galaxy Europe as an interactive tool
5 October 2023	Galaxy 23.1 Release	Galaxy 23.1 is here! Check out the highlights!
5 October 2023	[GTN news] New Feature: Embeddable GTN Tutorial Lists and UseGalaxy Workflow List Widgets
3 October 2023	New Review Article "A Galaxy of informatics resources for MS-based proteomics"	Mehta et al. have written a review about the Galaxy ecosystem as it has emerged as a pivotal player by providing a range of open-source tools and adaptable computing solutions for proteomics research
29 September 2023	Success Story: “TIaaS: Training Infrastructure as a Service for an MGnify training”	The MGnify team of EMBL-EBI have used [TIaaS](https://usegalaxy.eu/tiaas/) to run the [MGnify Interactive Tool](https://usegalaxy.eu/?tool_id=interactive_tool_mgnify_notebook) on scale
28 September 2023	New Paper "Integrative meta-omics in Galaxy and beyond"	Schiml et al. present three integrative meta-omics workflows, developed in Galaxy, for enhanced analysis and integration of metagenomics, metatranscriptomics, and metaproteomics, combined with a newly developed web-application, ViMO (Visualizer for Meta-Omics) to analyse metabolisms in complex microbial communities.
28 September 2023	1st BioNT Training workshop - A practical introduction to bioinformatics and RNA-seq using Galaxy	BioNT delivered its first training workshop, A practical introduction to bioinformatics and RNA-seq using Galaxy, from 4th to 8th of September, 2023. This post reports this workshop's organisation, the applicants and participants, as well as their feedback about it.
28 September 2023	Time to celebrate!	Galaxy having grown up and matured - happy 18th birthday!
25 September 2023	Connecting Astronomical Data Archives with Galaxy	Enabling astronomers to search and download data from IVOA-compliant archives directly within Galaxy
18 September 2023	Galaxy taking part @ German Conference on Bioinformatics (GCB) 2023	From the 11th to the 14th of September, Engy Nasr and Paul Zierep from the Freiburg Galaxy team travelled to Hamburg to join and present their posters at the German Conference on Bioinformatics (GCB) 2023
15 September 2023	Interactive tool collection is growing	New and improved interactive tools are available
13 September 2023	Galaxy Newsletter: September 2023	Galaxy is excited to announce the relaunch of our Galaxy Newsletter! We are thrilled to share updates on Galaxy, including topics such as events, scientific successes, and general community announcements.
11 September 2023	We are striking!	usegalaxy.eu closes job-queue on September 15th to support climate strike
23 August 2023	Galaxy Europe upgrades to Galaxy 23.1	We may have ancient buildings, but not an outdated Galaxy. The newest Galaxy release is now up and running.
14 August 2023	GCC2023 Meeting Report	That's a wrap! Catch up on all the highlights from GCC2023 here!
14 August 2023	ChatGPT in Galaxy via Jupyter notebooks	Use ChatGPT in Galaxy Europe via JupyterLab interactive tool.
11 August 2023	Survival analysis for right censored data using lifelines	Kaplan-Meier and Cox proportional hazards models are available for testing in Galaxy
7 August 2023	Generic scatter plots for any Galaxy tabular data	A tool generating interactive HTML scatter plots from Galaxy tabular data is now available for testing
24 July 2023	Freiburg Galaxy team at the EGI 2023	From June 19th to 23rd, members from the Freiburg Galaxy team traveled to Poznań, Poland to participate and present the EuroScienceGateway (ESG) project at the EGI2023 meeting
20 July 2023	[GTN news] New Feature: GTN User Preferences
11 July 2023	Carbon Emissions Reporting in Galaxy	Dynamic carbon emissions reporting for jobs in Galaxy
7 July 2023	Platform for Advanced Scientific Computing Conference 2023	Several Galaxy Community members gathered in Davos
30 June 2023	Galaxy Single-cell Updates	Latest updates on Galaxy tools, workflows and training materials developed by the Galaxy single-cell community
28 June 2023	Upscaling file uploads with rustus	Migrating the server software behind our file upload system
27 June 2023	[GTN news] AI4Life teams up with GTN to enhance training resources
24 June 2023	ELIXIR releases 2022 Annual Report - the Galaxy perspective	2022 as a year of growth for ELIXIR, and Galaxy being a part of it.
23 June 2023	GPU-enabled deep learning on Galaxy	Taking advantage of Galaxy's GPU computing nodes
21 June 2023	[GTN news] ELIXIR-UK Fellow Launches New FAIR Data Management Training
16 June 2023	Freiburg Galaxy team at the ELIXIR All Hands Meeting 2023	From June 5th to 8th, several members from the Freiburg Galaxy team travelled to Dublin, Ireland to participant and present their work at the ELIXIR All Hands Meeting 2023
16 June 2023	Galaxy for Astronomy: Integration of the FITS file format	Enabling native support and visualization of Astronomical FITS data in Galaxy
16 June 2023	Coordination meeting of EOSC-related projects funded under Horizon Europe	Members of the EuroScienceGateway project attended the EOSC Coordination meeting in Brussels
7 June 2023	[GTN news] New Feature: Pan-Galactic Tool Search
6 June 2023	New Paper "An accessible infrastructure for artificial intelligence using a Docker-based JupyterLab in Galaxy"
6 June 2023	EU Maintenance Announcement 12th June	EU database maintenance, 8hrs downtime estimated
3 June 2023	OSA2Micro – An Open Science Approach for Microbiology data integration
1 June 2023	[GTN news] GTN Celebrates Pride Month: Alan Hart & M. Tuberculosis
22 May 2023	Stronger together: first FAIR-EASE and EuroScienceGateway workshop	Presenting some outcomes from the first joined FAIR-EASE / EuroScienceGateway workshop
21 May 2023	New Paper "A panel of blood-derived miRNAs with a stable expression pattern as a potential pan-cancer detection signature"	Sabbaghian and colleagues have used the European Galaxy server to study miRNAs as biomarkers for cancer
17 May 2023	New Galaxy training: Genome-wide alternative splicing analysis	GTN hosts a new training for analyzing alternative splicing at genome-wide scale
11 May 2023	[GTN news] BY-COVID and RO-Crate collaboration brings new topic: FAIR Data, Workflows & More
8 May 2023	Replacing the Job Router with Zero Downtime on EU	Mothballing the Sorting Hat – how we migrated our dynamic job routing
6 May 2023	Galaxy taking part @ Applied Bioinformatics & Public Health Microbiology 2023	From the 3rd to the 5th of May, Engy Nasr from the Freiburg Galaxy team travelled to Hinxton, England to join and present her work at the Applied Bioinformatics & Public Health Microbiology 2023 conference
5 May 2023	Joining forces in EOSC: OpenAIRE and EuroScienceGateway sign Memorandum of Understanding	EuroScienceGateway and OpenAIRE team up to enhance accessibility and FAIRness of scientific data from the Galaxy project.
21 April 2023	Galaxy admin training	Galaxy Admin Training from April 17th to 21st in Ghent, Belgium.
21 April 2023	You understand the data? Call for action!	Civil disobedience by climate activists is neither futile nor a criminal act statement of scientists says
20 April 2023	[GTN news] New Feature: my.galaxy.training
19 April 2023	[GTN news] New Feature: GTN Rdoc
19 April 2023	[GTN news] New Feature: Click-to-run Workflows
19 April 2023	[GTN news] New Feature: Persistent URLs (PURLs) / Shortlinks
13 April 2023	[GTN news] New Feature: Learning Pathways!
31 March 2023	Using Galaxy & TIaaS to teach hands-on genome assembly and annotation	On Feb. 27 to Mar. 3, we (several VGP-associated instructors) used the UseGalaxy EU infrastructure to aid in teaching an online Physalia course of 40+ students how to assemble and annotate their own genome from their browser.
21 March 2023	Evaluation of the current usage and future needs of Galaxy for microbial data analysis - We Need Your Help!	The microGalaxy community of practice would like to learn more about use-cases where Galaxy was beneficial, and also the barriers that prevent researchers from using Galaxy. The aim is to collectively find solutions to improve user experience and reduce barriers. To this end, we are launching a survey to reach out to, and learn from, the microbial research community.
21 March 2023	[GTN news] New Feature: Trainer Directory! (Add yourself today!)
16 March 2023	New Paper "Return of the Tbx5; lineage-tracing reveals ventricular cardiomyocyte-like precursors in the injured adult mammalian heart"	Siatra et al. have used the European Galaxy server to identify cell populations capable of cardiac regeneration that we will be able to trace and monitor
15 March 2023	Effortlessly navigate your Galaxy history with enhanced search options	Data searchability in the Galaxy History panel has been taken to new levels with the advanced search options that allow users to not only find items with more ease, but also find relations within items in their history.
14 March 2023	Enjoy a much faster user interface	Following up on our modernization efforts, we now introduce a single top-router written in Vue, which brings all our Vue components together in a seamless user experience, dramatically reducing the number of required page reloads when navigating the Galaxy user interface.
8 March 2023	Galaxy Mentor Network: Reset	We launched the [Galaxy Mentor Network](https://galaxy-mentor-network.netlify.app/) one year ago with the idea to onboard new members in the community. Now, one year later, we realize that we failed. We still believe in the power that the Galaxy Mentor Network, and, in that spirit, we would like to relaunch the Galaxy Mentor Network with a new matching process.
8 March 2023	23.0 Update	Galaxy EU updates to 23.0 and enables new exciting features
5 March 2023	New Paper "Comparative phylogenomic insights of KCS and ELO gene families in Brassica species indicate their role in seed development and stress responsiveness"	Khan et al. present a comparative genome-wide analysis and mode of evolution of Ketoacyl-CoA synthase (KCS) and Elongation Defective Elongase (ELO) gene families
28 February 2023	New Paper "Intrasexual cuticular hydrocarbon dimorphism in a wasp sheds light on hydrocarbon biosynthesis genes in Hymenoptera"	Moris et al. have used the European Galaxy server to exploit the intrasexual CHC dimorphism in a mason wasp, Odynerus spinipes
27 February 2023	We are striking!	usegalaxy.eu closes job-queue on March 3 to support climate strike
24 February 2023	New Paper "The Planemo toolkit for developing, deploying, and executing scientific data analyses in Galaxy and beyond"	Bray et al. outline the implementation and broad range of functionality of Planemo, a software development kit for designing, testing, and executing Galaxy tools, workflows, and training materials.
23 February 2023	Exporting structured data like RO-Crate or BioComputeObjects	Galaxy has a very powerful and extensible exporting framework that now can export RO-Crate and BioComputeObjects
20 February 2023	Success Story: “TIaaS: Training Infrastructure as a Service”	TIaaS allows trainees’ jobs to be run preferentially and avoids long execution times, depending on the server load. By providing access to this service, the Galaxy Training Network ensured that TIaaS would be freely available to anyone and facilitated access to an extensive catalogue of FAIR training materials.
20 February 2023	New Paper "Genome-wide deposition of 6-methyladenine in human DNA reduces the viability of HEK293 cells and directly influences gene expression"	Broche and colleagues have used the European Galaxy server to analyse the role of m6dA in human DNA
9 February 2023	New Paper "Whole genome sequence analysis of the first reported isolate of Salmonella Agona carrying blaCTX-M-55 gene in Brazil"	Bertani et al. have used the European Galaxy server to analyse the whole genome sequence of Salmonella Agona carrying blaCTX-M-55 gene
8 February 2023	[GTN news] What are the most used tools in the GTN?
7 February 2023	Stronger together: FAIR-EASE and EuroScienceGateway join forces	Two Horizon Europe projects directed toward the development and deployment of the European Open Science Cloud (EOSC)—FAIR-EASE and EuroScienceGateway (ESG)—have agreed to closely cooperate over the next three years.
5 February 2023	How tools are created and maintained in Galaxy	A short summary about Galaxy tools development, maintenance and deployment.
4 February 2023	VirHunter: detection of novel RNA Viruses in Plant Sequencing Data	A Deep Learning-Based Method for the detection of novel RNA Viruses in Plant Sequencing Data
2 February 2023	[GTN news] GTN Celebrates Black History Month
26 January 2023	[GTN news] New Tutorial: Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition
24 January 2023	Simple and data privacy-aware publishing of genomic variance data from Galaxy to the Beacon project	Galaxy has gained a Beacon integration that enables users to publish genetic variance data conveniently via Beacon project
24 January 2023	[GTN news] New Feature: Prometheus Metrics endpoint
24 January 2023	GPU-enabled JupyterLab enables interactive AI use-cases in Galaxy	Democratising GPU infrastructures by providing accelerated JuypterLab instances via Galaxy and combining them with HPC workflows
23 January 2023	[GTN news] New GTN Feature Tag-based Topics enables new SARS-CoV-2 topic
20 January 2023	Accessibility in Galaxy 23.0 and beyond	Accessibility improvement Highlights for the upcoming 23.0 release, and a few words on accessibility in general
19 January 2023	Building a distributed compute network across Europe	The Work Package 3 of the EuroScienceGateway project
12 January 2023	The Climate community within the EuroScienceGateway project	Climate Community Strategy for Work Package 5
12 January 2023	Stimulate FAIR and reusable research with computational workflows	The Work Package 2 of the EuroScienceGateway project
9 January 2023	The Materials Science community within the EuroScienceGateway project	One of the most recent adopters of the Galaxy platfrom
4 January 2023	New Paper "Multimodal epigenetic changes and altered NEUROD1 chromatin binding in the mouse hippocampus underlie FOXG1 syndrome"	Akol et al. analyzed mouse FOXG1 functions on the chromatin level, having processed the multiomics data set on the European Galaxy server.
3 January 2023	New Paper "STAT3 signaling induced by the IL-6 family of cytokines modulates angiogenesis"	Rapp et al. investigated on IL-6 cytokines effects on angiogenesis invoking STAT3 signaling pathway, relying on the European Galaxy server
3 January 2023	Galaxy is part of NFDI4Bioimage
20 December 2022	New Paper "A panel of blood-derived miRNAs with a stable expression pattern as a potential pan-cancer detection signature"	Sabbaghian et al. used the European Galaxy server to identify the roles of miRNAs in cancer
12 December 2022	The Astronomy community and the EuroScienceGateway project	Towards harmonizing Open Data Practices in Astronomy with EuroScienceGateway community
8 December 2022	The Biodiversity community and the EuroScienceGateway project	One of the early adopters to embrace Open Science best practices
8 December 2022	Building blocks for a sustainable operating model of the EuroScienceGateway	Work Package 4 of the EuroScienceGateway project
30 November 2022	Slow Storage on EU	Storage bottleneck on usegalaxy.eu results in slow queueing times
29 November 2022	[GTN news] New Tutorial Suite: Deconvolution with MuSiC, from public data to disease interrogation!
24 November 2022	Introduction to the EuroScienceGateway project administration and project management	Work Package 1 of the EuroScienceGateway project
24 November 2022	Use-cases from early adopters to embrace Open Science best practices	Work Package 5 of the EuroScienceGateway project
21 November 2022	Task-based history export tracking	New pull request from David López merged: Add task-based history export tracking
20 November 2022	Annual EOSC Symposium 14-17th November 2022	The European Open Science Cloud (EOSC) had its main EOSC annual event. Find photos and recordings here.
18 November 2022	[GTN news] New Topic: Single Cell Analysis!
14 November 2022	BGE - Kickoff meeting	The BGE project kick-off meeting was celebrated between November 14th and November 18th in Leiden.
12 November 2022	Amazing Twitter Post on Cake-based explanation of single cell RNA sequencing	Combining baking and research
6 November 2022	EuroScienceGateway - Kickoff meeting	The EuroScienceGateway project started officially with a 2 days kickoff meeting with all 17 partners
5 November 2022	The start of the EuroScienceGateway - an EOSC project	EuroScienceGateway will deliver a robust, scalable, seamlessly integrated open infrastructure for data-driven research
4 November 2022	The European Galaxy Team is hiring a Bioinformatics training officer	Are you passionate about training in life sciences? The Freiburg Galaxy Team is looking for a team member who will develop, coordinate and implement training programs within international communities, especially via BioNT, a new multi-organization project funded by the European Commission, and via the Galaxy Training Network (GTN).
1 November 2022	Impact on Galaxy of OpenSSL 3.0.x Vulnerabilities CVE-2022-3602 and CVE-2022-3786 ("Spooky SSL")	Official severity downgraded to HIGH, exploitability and impact to Galaxy is very low
30 October 2022	New Paper "Semi-automated assembly of high-quality diploid human reference genomes"	Jarvis et al. determined which combination of current genome sequencing and assembly approaches yield the most complete and accurate diploid genome assembly with minimal manual curation
23 October 2022	UseGalaxy.eu Tool Updates for 2022-10-23
19 October 2022	Research Data Management in Galaxy	How Galaxy manages your (meta)data
17 October 2022	Galaxy as a cross-EOSC platform	New scientific collaboration agreement between EOSC-Life and EOSC-Pillar
16 October 2022	UseGalaxy.eu Tool Updates for 2022-10-16
14 October 2022	Well-being and Mental Health Guideline	Publication of the Guideline
12 October 2022	Outcomes of the European Galaxy Days	The European Galaxy Community gathered in Freiburg to discuss recent and future Galaxy developments
9 October 2022	UseGalaxy.eu Tool Updates for 2022-10-09
3 October 2022	UseGalaxy.eu Tool Updates for 2022-10-03
2 October 2022	UseGalaxy.eu Tool Updates for 2022-10-02
30 September 2022	EOSC4Cancer Kick-off Meeting"	EOSC4Cancer has been launched
28 September 2022	Introducing the Galaxy Global Hub	Find all your Galaxy info in one website
25 September 2022	UseGalaxy.eu Tool Updates for 2022-09-25
18 September 2022	UseGalaxy.eu Tool Updates for 2022-09-18	On 2022-09-18, the tools on UseGalaxy.eu were updated by our automated tool update and installation process.
11 September 2022	UseGalaxy.eu Tool Updates for 2022-09-11	On 2022-09-11, the tools on UseGalaxy.eu were updated by our automated tool update and installation process.
11 September 2022	[GTN news] New Tutorial: Data Manipulation
4 September 2022	UseGalaxy.eu Tool Updates for 2022-09-04	On 2022-09-04, the tools on UseGalaxy.eu were updated by our automated tool update and installation process.
28 August 2022	UseGalaxy.eu Tool Updates for 2022-08-28	On 2022-08-28, the tools on UseGalaxy.eu were updated by our automated tool update and installation process.
21 August 2022	UseGalaxy.eu Tool Updates for 2022-08-21	On 2022-08-21, the tools on UseGalaxy.eu were updated by our automated tool update and installation process.
16 August 2022	UseGalaxy.eu Tool Updates for 2022-08-16	On 2022-08-16, the tools on UseGalaxy.eu were updated by our automated tool update and installation process.
15 August 2022	UseGalaxy.eu Tool Updates for 2022-08-15	On 2022-08-15, the tools on UseGalaxy.eu were updated by our automated tool update and installation process.
10 August 2022	The European Galaxy Team is hiring!	The Freiburg Galaxy Team is looking for a Systems Engineer/DevOps Engineer!
7 August 2022	UseGalaxy.eu Tool Updates for 2022-08-07	On 2022-08-07, the tools on UseGalaxy.eu were updated by our automated tool update and installation process.
5 August 2022	OpenAPI support in Galaxy and Interactive API Documentation	Since Galaxy release 22.05 it's much easier to discover, explore, learn and experiment with the Galaxy Rest API.
31 July 2022	UseGalaxy.eu Tool Updates for 2022-07-31	On 2022-07-31, the tools on UseGalaxy.eu were updated by our automated tool update and installation process.
24 July 2022	UseGalaxy.eu Tool Updates for 2022-07-24	On 2022-07-24, the tools on UseGalaxy.eu were updated by our automated tool update and installation process.
19 July 2022	UseGalaxy.eu Tool Updates for 2022-07-19	On 2022-07-19, the tools on UseGalaxy.eu were updated by our automated tool update and installation process.
18 July 2022	UseGalaxy.eu Tool Updates for 2022-07-18	On 2022-07-18, the tools on UseGalaxy.eu were updated by our automated tool update and installation process.
10 July 2022	UseGalaxy.eu Tool Updates for 2022-07-10	On 2022-07-10, the tools on UseGalaxy.eu were updated by our automated tool update and installation process.
6 July 2022	New Paper "Creating a good learning and sharing environment for bioinformatics"	Tomas Klingström and J.I. Ohlsson have published a paper about the use of BioContainers, Galaxy, and the GTN for bioinformatics researchers.
3 July 2022	UseGalaxy.eu Tool Updates for 2022-07-03	On 2022-07-03, the tools on UseGalaxy.eu were updated by our automated tool update and installation process.
27 June 2022	UseGalaxy.eu Tool Updates for 2022-06-27	On 2022-06-27, the tools on UseGalaxy.eu were updated by our automated tool update and installation process.
27 June 2022	GCC2022: Registration open for Webinar mode	For those that won't attend in person, the GCC Organizing Committee is happy to announce a virtual webinar-like option
23 June 2022	Usegalaxy.eu has reached 50,000 registered users	Big thanks to everybody that has contributed to the success of UseGalaxy.eu and to each of the 50K users for using Galaxy! Next stop: 100K!
23 June 2022	Repurposing COVID-19 pipelines for the monkeypox virus	One aim of the BY-COVID project is to build a framework enabling data from newly emerging infectious disease threats to be made rapidly and widely accessible.
21 June 2022	Galaxy taking part @ Elixir All Hands 2022	During 6-9th of June, members of the European Galaxy team travelled to Amsterdam to join the ELIXIR All Hands meeting 2022 where we joined other colleagues from ELIXIR-DE.
19 June 2022	UseGalaxy.eu Tool Updates for 2022-06-19	On 2022-06-19, the tools on UseGalaxy.eu were updated by our automated tool update and installation process in Jenkins Build #332
12 June 2022	UseGalaxy.eu Tool Updates for 2022-06-12
5 June 2022	UseGalaxy.eu Tool Updates for 2022-06-05
2 June 2022	[GTN news] New Tutorial: Workflow Reports
29 May 2022	UseGalaxy.eu Tool Updates for 2022-05-29	On 2022-05-29, the tools on UseGalaxy.eu were updated by our automated tool update and installation process in Jenkins Build #329
27 May 2022	New Paper "Transcriptome profiling of cisplatin resistance in triple-negative breast cancer: New insight into the role of PI3k/Akt pathway"	Amir Sabbaghian and colleagues have published a paper related to the resistance to cisplatin in the treatment of triple negative breast cancer.
23 May 2022	UseGalaxy.eu Tool Updates for 2022-05-23
20 May 2022	[GTN news] GTN Metadata Schemas
15 May 2022	UseGalaxy.eu Tool Updates for 2022-05-15
8 May 2022	UseGalaxy.eu Tool Updates for 2022-05-08
1 May 2022	UseGalaxy.eu Tool Updates for 2022-05-01
28 April 2022	Training Infrastructure Feedback from Hans-Rudolf Hotz and Lucille Delisle	After 2 years running the SIB "Galaxy Introduction for Life Scientists" course only online, we were super happy to stand in front of a crowd and meet again the students in person.
24 April 2022	UseGalaxy.eu Tool Updates for 2022-04-24	On 2022-04-24, the tools on UseGalaxy.eu were updated by our automated tool update and installation process in Jenkins Build #323
20 April 2022	Towards a sustainable storage, enabling co-financing of public infrastructure	Research groups and networks can include their own storage into the European Galaxy server and decide about quota and data policies.
17 April 2022	UseGalaxy.eu Tool Updates for 2022-04-17
12 April 2022	[GTN news] New Tutorial Feature: Choose Your Own Tutorial	It has been a long discussed feature within the GTN Tutorial Author Community: how can we provide trainees with choice in their tutorials, and how can we as trainers not duplicate large tutorials just to show a slightly different path at one point?.
11 April 2022	Complete human genome T2T-CHM13v2.0 available in Galaxy	Something that the scientific community has been eagerly awaiting: the first complete, gap-free sequence for all 24 human chromosomes (including Y)
10 April 2022	UseGalaxy.eu Tool Updates for 2022-04-10
3 April 2022	UseGalaxy.eu Tool Updates for 2022-04-03
28 March 2022	UseGalaxy.eu Tool Updates for 2022-03-28
23 March 2022	Enough talking - time to act!	The next global climate strike will be on March 25!
20 March 2022	Genomic analysis on Galaxy using Azure CycleCloud
20 March 2022	UseGalaxy.eu Tool Updates for 2022-03-20
14 March 2022	[GTN news] New Tutorial: VGP assembly pipeline	We are proud to announce that, as result of the collaboration with the Vertebrate Genomes Project (VGP), a new training describing the VGP assembly pipeline is now available in the Galaxy Training Network
14 March 2022	UseGalaxy.eu Tool Updates for 2022-03-14
13 March 2022	Announcing the Workflows Community Initiative (WCI)	The Workflows Community Initiative has lunched the new website at workflows.community. The Freiburg Galaxy team is part of this Inititive to help improving computational workflows for everyone.
13 March 2022	Announcing the Workflows Community Initiative (WCI)
7 March 2022	New Paper "Gut microbiota drives age-related oxidative stress and mitochondrial damage in microglia via the metabolite N6-carboxymethyllysine"	Our work led by Omar Mossad and Thomas Blank (Institute of Neuropathology, University of Freiburg) has been published last week in Nature Neuroscience
7 March 2022	New Paper "Distal and proximal cis-regulatory elements sense X chromosome dosage and developmental state at the Xist locus"	Congratulations Rutger Gjaltema and team for your latest findings about X chromosome regulations.
6 March 2022	UseGalaxy.eu Tool Updates for 2022-03-06
5 March 2022	New Paper "Impact of high platelet turnover on the platelet transcriptome: Results from platelet RNA-sequencing in patients with sepsis"	Thomas Nührenberg and team published a new paper in PLOS ONE about the "Impact of high platelet turnover on the platelet transcriptome".
28 February 2022	New Paper "Pluripotency factors determine gene expression repertoire at zygotic genome activation"
27 February 2022	UseGalaxy.eu Tool Updates for 2022-02-27
25 February 2022	New Paper "Democratizing data-independent acquisition proteomics analysis on public cloud infrastructures via the Galaxy framework"	Matthias Fahrner from the University of Freiburg is defending his PhD today.
25 February 2022	Machine learning in Galaxy	Artificial intelligence (machine learning and deep learning) algorithms are being increasingly applied in several fields of Bioinformatics such as drug-response and protein structure prediction, imputing missing data in single-cell gene expression, modelling evolution in biological sequences and many more.
24 February 2022	AlphaFold now available in Galaxy	It seems the whole world is talking about AlphaFold, the AI system that predicts a protein’s 3D structure from its amino acid sequence that achieves accuracy comparable with real-life experiments.
22 February 2022	ELIXIR staff exchange between the German and Italian ELIXIR nodes
21 February 2022	New Paper "The temperature-regulated DEAD-box RNA helicase CrhR interactome: autoregulation and photosynthesis-related transcripts"	Thanks Anzhela Migur and team for sharing your recent work about the temperature-regulated DEAD-box RNA helicase CrhR interactome.
20 February 2022	UseGalaxy.eu Tool Updates for 2022-02-20
15 February 2022	Protein target prediction of a bioactive ligand with Align-it and ePharmaLib	Bioactive compounds often bind to several target proteins, thereby exhibiting polypharmacology.
14 February 2022	UseGalaxy.eu Tool Updates for 2022-02-14
13 February 2022	UseGalaxy.eu Tool Updates for 2022-02-13
6 February 2022	UseGalaxy.eu Tool Updates for 2022-02-06
1 February 2022	IT security management of the University of Freiburg certified by TÜV SÜD	TÜV SÜD has awarded the University's data centre the international certification for information security management systems ISO/IEC 27001.
1 February 2022	IT security management of the University of Freiburg certified by TÜV SÜD
29 January 2022	UseGalaxy.eu Tool Updates for 2022-01-29
28 January 2022	[GTN news] New Feature: Automatic RMarkdown	Further building on the work in the automatic Jupyter Notebook, we’ve now re-written the Jupyter export to be faster, and more importantly added support for R and RMarkdown!
23 January 2022	UseGalaxy.eu Tool Updates for 2022-01-23
20 January 2022	Usegalaxy.eu surpassed 40.000 registered users	We are celebrating that usegalaxy.eu reached 40,000 registered users last November! Over the last year, the number of registered users has almost doubled, from 25,000 to more than 41,000 by January 2022.
16 January 2022	New Pre-Print "Selection analysis identifies unusual clustered mutational changes in Omicron lineage BA.1 that likely impact Spike function"	Among the 30 non-synonymous nucleotide substitutions in the Omicron S-gene are 13 that have only rarely been seen in other SARS-CoV-2 sequences.
14 January 2022	UseGalaxy.eu Tool Updates for 2022-01-14
17 December 2021	UseGalaxy.eu Tool Updates for 2021-12-17
16 December 2021	Usegalaxy.eu project infrastructure and CVE-2021-44228 vulnerability	The Freiburg galaxy team reviewed the Usegalaxy.eu software stack, looking for the presence of vulnerable versions of the Log4j library.
14 December 2021	GTN Smörgåsbord 2: 14-18 March	A second Smörgåsbord with even more Galaxy Training
14 December 2021	[GTN news] Support for annotating Funding Agencies	The Galaxy Training Network will now support annotating Funding Agencies on training materials.
14 December 2021	[GTN news] GTN Smörgåsbord 2: Tapas Edition
8 December 2021	Accessible and scalable detection and identification of foodborne pathogens, a project with Biolytix and funded by EOSC-Life	Thanks to funding from EOSC-Life, the Freiburg Galaxy team will work in 2022 with Biolytix, a Swiss Small and Medium-sized Enterprise (SME) specialized in molecular biology and microbiological analyses, toward Accessible and scalable detection and identification of foodborne pathogens.
1 December 2021	How does the GTN stay FAIR and Collaborative?	Find out how contributing simple markdown tutorials can result in fantastically FAIR training.
1 December 2021	[GTN news] New FAQs: How does the GTN stay FAIR and Collaborative
1 December 2021	[GTN news] New Tutorials: PacBio data QC and Genome Assembly, and Genome Annotation with Funannotate	We have just finished a new collection of training material for genome assembly and annotation!
29 November 2021	Omicron and SARS-CoV-2 genome surveillance	A first view of the Omicron lineage’s mutational pattern derived transparently and fully reproducibly from raw sequencing reads
27 November 2021	UseGalaxy.eu Tool Updates for 2021-11-27
25 November 2021	An overview and statistics on the Galaxy Help Forum	From the GHelp supporting group, we thank you for the trust you place in us every day.
25 November 2021	UseGalaxy.eu updated to 21.09
23 November 2021	GTN Video Library	Videos from online training events are now easier to find.
23 November 2021	[GTN news] New Feature: GTN Video Library
21 November 2021	UseGalaxy.eu Tool Updates for 2021-11-21
17 November 2021	4th de.NBI Cloud User meeting	The 4th de.NBI Cloud User meeting took place from 12th to 24th of November 2021. Many researchers from different bioinformatics research areas gathered to learn more about cloud computing and the de.NBI Cloud.
15 November 2021	Biohackathon Europe 2021	Last week we had the BioHackathon Europe 2021 in Barcelona, as a hybrid event and with participants from all over the world.
13 November 2021	Training Infrastructure feedback: FORCeS eScience course	Tools in Climate Science: Linking Observations with Modelling
13 November 2021	UseGalaxy.eu Tool Updates for 2021-11-13
10 November 2021	GTN API with OpenAPI 3 specification	Access data from the GTN in a more accessible, API based way.
10 November 2021	[GTN news] New Feature: GTN API with OpenAPI 3 specification
6 November 2021	UseGalaxy.eu Tool Updates for 2021-11-06
2 November 2021	Galaxy Release 21.09	Tool Panel Views, Collections, Reports, Remote Data, FastAPI, SQLAlchemy & much more!
30 October 2021	UseGalaxy.eu Tool Updates for 2021-10-30
23 October 2021	UseGalaxy.eu Tool Updates for 2021-10-23
18 October 2021	Training Infrastructure Feedback from Dr. Theodora Tsirka	We have received feedback about TIaaS from Dr. Theodora Tsirka, during the Training School on Microbiome Sequencing and Data Analysis
16 October 2021	UseGalaxy.eu Tool Updates for 2021-10-16
13 October 2021	BY-COVID: A new EU project for pandemic preparedness	A new €12 million Horizon Europe funded project which will tackle the data challenges that can hinder effective pandemic response.
12 October 2021	[GTN news] Attention Contributors: GTN Performance Enhancements
12 October 2021	UseGalaxy.eu Use Case: cellular specification, differentiation and morphogenesis of the mucociliary epithelium	Sarah Bowden from the Innere Medizin IV (Nephrologie und Allgemeinmedizin) and ZBSA - Center for Biological Systems Analysis in Freiburg (Germany) has shared with us the main area of research of her project.
12 October 2021	[GTN news] New Topic: Data Science Survival Kit	As part of our work under the Gallantries Grant we are establishing a new topic within the GTN specifically focused on Data Science skills.
11 October 2021	UseGalaxy.eu Use Case: microRNAs in heart disease	Ileana Duran Fernandez from the School of Medicine of the Technical University of Munich works on heart disease.
8 October 2021	A proteomics sample metadata representation for multiomics integration and big data analysis	An extension and implementation of the MAGE-TAB format for proteomics (MAGE-TAB-Proteomics).
6 October 2021	New brochure from ELIXIR Germany	ELIXIR Germany has published the handout "ELIXIR GERMANY - Shaping the Bioinformatics Infrastructure for Life Sciences in Europe".
5 October 2021	UseGalaxy.eu FTP Server Update	On 2021-10-06, the FTP server accessible through the domain ftp.usegalaxy.eu will be upgraded with a new hardware and a new configuration.
2 October 2021	UseGalaxy.eu Tool Updates for 2021-10-02
1 October 2021	Teaching bioinformatics through blood, mucus and tears	Watch out for that My Little Pony baby stroller.
29 September 2021	[GTN news] Got a minute? Take our survey about Galaxy for training and have your say!
29 September 2021	Got a minute? Take our survey about Galaxy for training and have your say!
26 September 2021	UseGalaxy.eu Tool Updates for 2021-09-26
24 September 2021	[GTN news] New Feature: Automatic Jupyter Notebooks
23 September 2021	New Paper "Ready-to-use public infrastructure for global SARS-CoV-2 monitoring"
20 September 2021	UseGalaxy.eu Tool Updates for 2021-09-20
17 September 2021	Enough talking - time to act!
15 September 2021	UseGalaxy.eu as a cross-disciplinary platform for European researchers
11 September 2021	UseGalaxy.eu Tool Updates for 2021-09-11
10 September 2021	Annual reports 2020: ELIXIR and IFB	The ELIXIR and IFB annual reports for 2020 are out, and they highlight Galaxy work throughout.
4 September 2021	UseGalaxy.eu Tool Updates for 2021-09-04
3 September 2021	UseGalaxy.eu Use Case: Marine turtle tumour disease
1 September 2021	Win, Win, Win. When users support education programs to say thanks for free Galaxy resources
28 August 2021	UseGalaxy.eu Tool Updates for 2021-08-28
27 August 2021	UseGalaxy.eu Use Case: Antibody responses following vaccination
24 August 2021	Training Infrastructure as a Service (TIaaS) is sponsored by EOSC-Life	Anyone providing training is eligible to request the use of this service.
24 August 2021	Updates from the ELIXIR Galaxy Community	An updated ELIXIR Galaxy website includes our goals, with a special emphasis on interactions with the local, domain-specific and global communities; plus much more
21 August 2021	UseGalaxy.eu Tool Updates for 2021-08-21
20 August 2021	UseGalaxy.eu Use Case: Food safety research
14 August 2021	UseGalaxy.eu Tool Updates for 2021-08-14
13 August 2021	UseGalaxy.eu Use Case: Sex determination of fish species
7 August 2021	UseGalaxy.eu Tool Updates for 2021-08-07
30 July 2021	UseGalaxy.eu Use Case: Circadian research
28 July 2021	[GTN news] New Feature: a feedback page to aggregate and display feedback answers
27 July 2021	UseGalaxy.eu Tool Updates for 2021-07-27
27 July 2021	[GTN news] Accessibility Improvements
25 July 2021	UseGalaxy.eu Tool Updates for 2021-07-25
23 July 2021	UseGalaxy.eu Use Case: Heart research
21 July 2021	Freiburg Galaxy Team at the Galaxy Community Conference 2021
17 July 2021	UseGalaxy.eu Tool Updates for 2021-07-17
16 July 2021	UseGalaxy.eu Use Case: Epigenomics and transcriptomics in cancer
13 July 2021	Highlights from the Galaxy Community Conference 2021	399 participants from 55 countries
10 July 2021	UseGalaxy.eu Tool Updates for 2021-07-10
9 July 2021	UseGalaxy.eu Use Case: Plant genomics
5 July 2021	UseGalaxy.eu Use Case: colorectal cancer research
4 July 2021	ownCloud and Nextcloud integration for your private data
3 July 2021	UseGalaxy.eu Tool Updates for 2021-07-03
2 July 2021	UseGalaxy.eu Use Case: Genomics, evolution, and ecology of organohalide-respiring bacteria
2 July 2021	"Galaxy for microbiome via ASaiM story - From a local project to a global effort to support microbiome data analysis" - Talk at Holistic Bioinformatic Approaches used in Microbiome Research
1 July 2021	Women in Data Science 2021 - Perspectives in Industry and Academia - Join Bayer AG and de.NBI / ELIXIR Germany event
30 June 2021	[GTN news] New Tutorial: Mutation calling, viral genome reconstruction and lineage/clade assignment from SARS-CoV-2 sequencing data
28 June 2021	Open Life Science program & the Galaxy community: involvement in OLS-3 and invitation to apply to the next cohort	Open Life Science (OLS) is an online mentoring & training program
26 June 2021	[GTN news] New Tutorial: Visualization of RNA-Seq results with Volcano Plot in R
26 June 2021	UseGalaxy.eu Tool Updates for 2021-06-26
25 June 2021	UseGalaxy.eu Use Case: Genetics research on dairy cattle
25 June 2021	[GTN news] New Tutorial: GitPod for contributing to the GTN
21 June 2021	UseGalaxy.eu Tool Updates for 2021-06-21
19 June 2021	UseGalaxy.eu Tool Updates for 2021-06-19
18 June 2021	UseGalaxy.eu Use Case: Zika virus effects on brain and brain tumours
12 June 2021	UseGalaxy.eu Tool Updates for 2021-06-12
11 June 2021	UseGalaxy.eu update to 21.05
10 June 2021	Training Infrastructure Feedback from Abdus Salam
9 June 2021	A Galaxy of tools at your fingertips inside of Broad Institutes Terra
7 June 2021	New Paper "Galaxy-ML: An accessible, reproducible, and scalable machine learning toolkit for biomedicine"	The Galaxy-ML platform provides all the tools necessary to define a learner, train it, evaluate it, and visualize its performance.
5 June 2021	UseGalaxy.eu Tool Updates for 2021-06-05
4 June 2021	[GTN news] New Tutorial: Genome Annotation with Apollo
1 June 2021	[GTN news] Oh no, it changed! Quick, to the archive menu.
29 May 2021	New Paper "Tryptophan metabolism drives dynamic immunosuppressive myeloid states in IDH-mutant gliomas"
29 May 2021	UseGalaxy.eu Tool Updates for 2021-05-29
28 May 2021	Webinars: Galaxy Resources for ...	Watch them now.
25 May 2021	[GTN news] Contributing to BioBlend as a developer
25 May 2021	New Paper "Robust and efficient single-cell Hi-C clustering with approximate k-nearest neighbor graphs"
25 May 2021	[GTN news] New Feature: Easy Abbreviation
20 May 2021	¿Hablas español?: The first curated tutorial in Spanish!	The first Spanish tutorial is live! Galaxy has always had google-translated tutorials, but we are now embarking on a project to assess the learning experience with human-translated, vs google-translated, bioinformatics tutorials.
20 May 2021	[GTN news] ¿Hablas español?: The first curated tutorial in Spanish!
19 May 2021	UseGalaxy.eu Apollo Update
14 May 2021	Two New Teaching Papers using Galaxy	Two hand-in-hand teaching papers have been published this week using Galaxy as a teaching platform.
13 May 2021	UseGalaxy.eu Tool Updates for 2021-05-13
13 May 2021	New Paper "Novel insights into the electrophysiology of murine cardiac macrophages: relevance of voltage-gated potassium channels"
11 May 2021	COVID updates: B.1.617.2 detected in COG-UK data from the beginning of April	We checked the COG-UK data to see if we’d find representative samples of B.1.617.2 (one of the Indian lineages, and a Variant of Concern).
11 May 2021	UseGalaxy.eu Tool Updates for 2021-05-11
4 May 2021	GCC2021 Abstract and Fellowship Submission, and Early Registration Deadlines Extended	Talks & Fellowships due 17 May; Poster/Demos due 14 June
4 May 2021	May 2021 Galactic News	GCC2021 and James Taylor Video Deadlines Extended, plus a whole lot more.
30 April 2021	Outcomes of the workshop 'SARS-CoV-2 Data Analysis and Monitoring with Galaxy'	Building capacity, both in the analysis and data management sides of SARS-CoV-2
30 April 2021	Plant Transcriptomics Workshop: A Summary	New platform, new learners, new paradigms.
29 April 2021	Monitoring of raw open data for SARS-CoV-2 genome surveillance	UseGalaxy.eu is now automatically collecting, and analyzing raw sequencing data published by the COVID-19 Genomics UK Consortium (COG-UK).
26 April 2021	UseGalaxy.eu Tool Updates for 2021-04-26
25 April 2021	30,000 users
19 April 2021	The Galaxy community involved in several ELIXIR Implementation Studies
17 April 2021	UseGalaxy.eu Tool Updates for 2021-04-17
15 April 2021	Apply for a GCC2021 Conference Fellowship
14 April 2021	GCC2021 Conference Fellowships	Apply by May 17
14 April 2021	GCC2021 Registration is Open	Please join us at Galaxy's annual community gathering
14 April 2021	GCC2021 Abstract Submission are Open	Abstracts are due May 17
14 April 2021	UseGalaxy.eu Tool Updates for 2021-04-14
12 April 2021	April 2021 Galactic News	GCC2021 Abstracts and Registration are open, plus lots more.
10 April 2021	[GTN news] New Tutorials: Whole transcriptome analysis of Arabidopsis thaliana
10 April 2021	UseGalaxy.eu Tool Updates for 2021-04-10
8 April 2021	Updates from the Single-Cell Community in Freiburg
6 April 2021	[GTN news] New Feature: Video Player
3 April 2021	UseGalaxy.eu Tool Updates for 2021-04-03
3 April 2021	Training Infrastructure Feedback from Simon Gladman
30 March 2021	[GTN news] New Tutorial: Downstream Single-cell RNA Plant analysis with ScanPy
29 March 2021	New Paper "CryptoGenotyper: A new bioinformatics tool for rapid Cryptosporidium identification"
29 March 2021	New Paper "The Salmonella In Silico Typing Resource (SISTR): An Open Web-Accessible Tool for Rapidly Typing and Subtyping Draft Salmonella Genome Assemblies"
28 March 2021	Training Infrastructure Feedback from Dr. Fotis Psomopoulos
27 March 2021	UseGalaxy.eu Tool Updates for 2021-03-27
25 March 2021	How to import a workflow from the Workflow Hub and run it on remote COVID-19 data
25 March 2021	Training Infrastructure Feedback from Dr. Ricardo Gonzalo Sanz
25 March 2021	Galaxy-ELIXIR webinars series: Advanced Features
24 March 2021	[GTN news] New Tutorials: Genome assembly of a MRSA genome
24 March 2021	[GTN news] New Feature: FAQs
22 March 2021	Training Infrastructure Feedback from Martin Čech
20 March 2021	UseGalaxy.eu Tool Updates for 2021-03-20
19 March 2021	Training Infrastructure Feedback from Dr. Tuan Leng Tay
19 March 2021	Galaxy Career Center
18 March 2021	[GTN news] New Tutorial: Object tracking using CellProfiler
18 March 2021	[GTN news] Next GTN CoFest May 20, 2021
18 March 2021	[GTN news] Galaxy Community Conference 2021
17 March 2021	March 2021 Galactic News	New Featured and Community News sections; new events, releases, training, and lots of videos
17 March 2021	[GTN news] Report on the GTN Smörgåsbord event
17 March 2021	[GTN news] Galaxy 21.01 released!
16 March 2021	2021 Google Summer of Code	Galaxy is participating
16 March 2021	UseGalaxy.eu Tool Updates for 2021-03-16
16 March 2021	GTN Smörgåsbord Report (Spoiler: it was awesome)
16 March 2021	UseGalaxy.eu update to 21.01
16 March 2021	[GTN news] New Feature: Automatic Slides-to-video conversion
13 March 2021	RADseq data analysis (on mobile phone while baby is sleeping)	(on mobile phone while baby is sleeping)
10 March 2021	Successful use cases from EOSC-Life using Galaxy	The first round of EOSC-Life demonstrators has driven eight successful use cases, three of them using Galaxy.
9 March 2021	The European HealthyCloud consortium kick-off is today!
7 March 2021	New Paper "ChiRA: an integrated framework for chimeric read analysis from RNA-RNA interactome and RNA structurome data"
6 March 2021	European Galaxy Server part of CatRIS
1 March 2021	[GTN news] Galaxy Admin Training Success
28 February 2021	New introductory video to the Galaxy Training Network
27 February 2021	UseGalaxy.eu Tool Updates for 2021-02-27
25 February 2021	Galaxy-ELIXIR webinar series: Open Data Infrastructures to tackle COVID-19 pandemic
22 February 2021	Training Infrastructure Feedback from Mali Salmon-Divon
20 February 2021	UseGalaxy.eu Tool Updates for 2021-02-20
20 February 2021	Login via ELIXIR-AAI, Google, LinkedIn, or your ORCID iD
18 February 2021	Meet & Join the Galaxy Community
18 February 2021	New Paper "Next generation sequencing of SARS-CoV-2 genomes: challenges, applications and opportunities"
17 February 2021	Czech Galaxy Community Questionnaire & Mailing List	Chceme od tebe slyšet!
15 February 2021	Using secure BioContainers to run Galaxy tools
14 February 2021	Massive open online education party: GTN Smörgåsbord	Starting Monday the 15th of February, the Galaxy Training Network (GTN) is running a global Galaxy online course
13 February 2021	UseGalaxy.eu Tool Updates for 2021-02-13
8 February 2021	February 2021 Galactic News	Events, platform news, blog posts, videos, pubs, jobs and releases
8 February 2021	February Galactic News!
6 February 2021	Galaxy Metabolomics Mini-Symposium report	next meetings are planned for March 11, May 6 and at the Galaxy Community Conference in July.
6 February 2021	UseGalaxy.eu Tool Updates for 2021-02-06
5 February 2021	New hardware: More RAM
5 February 2021	The European Galaxy server listed as an official resource on the COVID-19 Data Portal
4 February 2021	2021 Galaxy Community Conference will be virtual, global, and affordable	And globally accessible
4 February 2021	Galaxy Admin Training with the Gallantries
1 February 2021	Three articles related to COVID-19 research using Galaxy in the de.NBI brochure	Just part of how de.NBI is supporting COVID-19 research
30 January 2021	UseGalaxy.eu Tool Updates for 2021-01-30
30 January 2021	New and updated CNV and Variant Calling tools	on UseGalaxy.eu and in the Toolshed
30 January 2021	ISMB 2020 conference videos available on YouTube
28 January 2021	Training Infrastructure Feedback from Lachlan Gray
26 January 2021	UseGalaxy.eu Tool Updates for 2021-01-26
22 January 2021	Variant Analysis of SARS-CoV-2 Sequencing Data (Jan 2021 update)	January 2021 update
18 January 2021	Nora, the new visualisation in Galaxy	A new framework for medical imaging research
18 January 2021	Major update to SearchGUI and PeptideShaker
18 January 2021	UseGalaxy.fr is hiring
15 January 2021	New Galaxy Community Organization: Working Groups
12 January 2021	Nominate a training for the 2021 Galaxy Community Conference (GCC2021)
11 January 2021	New Paper "Tool recommender system in Galaxy using deep learning"	by Anup Kumar, Helena Rasche, Björn Grüning, Rolf Backofen in GigaScience
7 January 2021	January 2021 Galactic News	Events, platform news, blog posts, videos, pubs, jobs and releases
4 January 2021	GTN Plant-related trainings
2 January 2021	UseGalaxy.eu Tool Updates for 2021-01-02
31 December 2020	The European Galaxy Server in 2020	What a shitty year! But it’s over and we hope you and your family are safe and healthy.
28 December 2020	European Galaxy Flavours
26 December 2020	UseGalaxy.eu Tool Updates for 2020-12-26
24 December 2020	UseGalaxy.eu Tool Updates for 2020-12-24
22 December 2020	Open Life Science program & the Galaxy community: involvement in OLS-2 and invitation to apply to the next cohort	involvement in OLS-2 and invitation to apply to the next cohort
16 December 2020	New Paper "Galaxy CLIP-Explorer: a web server for CLIP-Seq data analysis"
15 December 2020	New Paper "Proximity to injury, but neither number of nuclei nor ploidy define pathological adaptation and plasticity in cardiomyocytes"
8 December 2020	December 2020 Galactic News	And what a month it is
8 December 2020	Training Infrastructure Feedback on the ELIXIR Belgium workshop “DDA and DIA proteomic analysis in Galaxy”
3 December 2020	UseGalaxy.eu update to 20.09
28 November 2020	UseGalaxy.eu Tool Updates for 2020-11-28
27 November 2020	Training Infrastructure Feedback from Ambre Jousselin
27 November 2020	Insights from the first cross-training between EOSC-Life and EOSC-Nordic
24 November 2020	Activity report of the last 5 years of the Freiburg Galaxy Team	Crucial infrastructure serving more than 22,000 researchers
23 November 2020	Images stored in local OMERO instances are now available from Galaxy	An important step towards the accessibility of bioimage data
22 November 2020	New Paper "Decitabine induces gene derepression on monosomic chromosomes: in vitro and in vivo effects in adverse-risk cytogenetics AML"
21 November 2020	UseGalaxy.eu Tool Updates for 2020-11-21
21 November 2020	New Paper "Diabetes changes gene expression but not DNA methylation in cardiac cells"
20 November 2020	Simplified submission of SARS-CoV-2 data to open databases
19 November 2020	Open Source Software Strategy approved by the European Commission
18 November 2020	The NFDI-DataPLANT consortium has already kick-off!
17 November 2020	New hardware: More storage and GPUs	de.NBI-Cloud has extended the support to the European Galaxy Server
16 November 2020	Biohackathon Europe 2020	The Galaxy community has participated in several projects
14 November 2020	UseGalaxy.eu Tool Updates for 2020-11-14
7 November 2020	UseGalaxy.eu Tool Updates for 2020-11-07
3 November 2020	November 2020 Galactic News	JXTX Foundation, Events, Platforms, Jobs, Pubs, ...
31 October 2020	UseGalaxy.eu Tool Updates for 2020-10-31
29 October 2020	The first Paper Cuts Community Fest was a success!	So we will do this again in November!
24 October 2020	UseGalaxy.eu Tool Updates for 2020-10-24
23 October 2020	New Paper "NanoGalaxy: Nanopore long-read sequencing data analysis in Galaxy"	New paper in GigaScience
23 October 2020	New Paper "A single-cell RNA-sequencing training and analysis suite using the Galaxy framework"
22 October 2020	More than 8000 packages/containers in Bioconda/BioContainers from more than 1000 contributors	from 1000+ contributors
22 October 2020	The EOSC-Life newsletter is out!	Galaxy training, CellProfiler, and more
21 October 2020	20,000 users
17 October 2020	UseGalaxy.eu Tool Updates for 2020-10-17
14 October 2020	Training Infrastructure Feedback from Leighton Pritchard	Addressing challenges the global coronavirus pandemic
10 October 2020	UseGalaxy.eu Tool Updates for 2020-10-10
8 October 2020	The Community Against COVID-19
7 October 2020	October 2020 Galactic News	Events & JTech, platforms, blog posts, tutorials, pubs, releases, ...
3 October 2020	UseGalaxy.eu Tool Updates for 2020-10-03
26 September 2020	UseGalaxy.eu Tool Updates for 2020-09-26
23 September 2020	EOSC-Life Open Calls	Two funding opportunities are now open in EOSC-Life.
15 September 2020	Remote training using Galaxy	Lessons learned from our ELIXIR Galaxy Machine Learning Workshop
12 September 2020	UseGalaxy.eu Tool Updates for 2020-09-12
11 September 2020	Enough talking - time to act!
10 September 2020	The ELIXIR tools platform for COVID-19 research at the ECCB2020
8 September 2020	EOSC-Life has awarded two training projects to the European Galaxy team	From 1st EOSC-Life Training Open Call
7 September 2020	Freiburg Galaxy team is participating to the 2nd cohort of the Open Life Science program
6 September 2020	Galaxy Europe Branding Material
5 September 2020	UseGalaxy.eu Tool Updates for 2020-09-05
2 September 2020	New Paper "No more business as usual: Agile and effective responses to emerging pathogen threats require open data and open analytics"
1 September 2020	September 2020 Galactic News	BCC2020 & GCC2021, events, platforms, blog posts, tutorials, pubs, releases, obs ...
1 September 2020	New Paper "pyGenomeTracks: reproducible plots for multivariate genomic data sets"
31 August 2020	New Paper "Sawfly Genomes Reveal Evolutionary Acquisitions That Fostered the Mega-Radiation of Parasitoid and Eusocial Hymenoptera"
30 August 2020	New Paper "An epigenetic map of malaria parasite development from host to vector"
29 August 2020	UseGalaxy.eu Tool Updates for 2020-08-29
22 August 2020	Galaxy will join the NFDI-DataPLANT consortium in October 2020	UseGalaxy.eu and DataPLANT consortium to record and deliver large data volumes for modern crop research
22 August 2020	UseGalaxy.eu Tool Updates for 2020-08-22
22 August 2020	3 steps to get your tool into Galaxy - A real-world example	A real-world example
15 August 2020	UseGalaxy.eu Tool Updates for 2020-08-15
8 August 2020	UseGalaxy.eu Tool Updates for 2020-08-08
1 August 2020	UseGalaxy.eu Tool Updates for 2020-08-01
30 July 2020	Galaxy Africa Community Update
29 July 2020	UseGalaxy.eu update to 20.05
27 July 2020	Climate Science at BCC2020	July has been a very busy month for Galaxy Climate
25 July 2020	UseGalaxy.eu Tool Updates for 2020-07-25
25 July 2020	Training Infrastructure Feedback from Rodrigo Ortega Polo
23 July 2020	Computational chemistry at BCC2020
22 July 2020	UseGalaxy.eu Tool Updates for 2020-07-22
19 July 2020	The landscape of SARS-CoV-2 RNA modifications	Studying the RNA modifications of SARS-CoV-2 to improve understanding of SARS viruses
18 July 2020	UseGalaxy.eu Tool Updates for 2020-07-18
13 July 2020	UseGalaxy.eu Tool Updates for 2020-07-13
3 July 2020	Intuitive, reproducible high-throughput molecular dynamics in Galaxy: a tutorial
3 July 2020	Processing of Single Cell RNA-Seq Data with Galaxy
1 July 2020	July 2020 Galactic News	BCC2020, SRA, Events, Platforms, Training, Jobs, ...
1 July 2020	CellProfiler now available in Galaxy
20 June 2020	UseGalaxy.eu Tool Updates for 2020-06-20
16 June 2020	UseGalaxy.eu Tool Updates for 2020-06-16
13 June 2020	UseGalaxy.eu Tool Updates for 2020-06-13
11 June 2020	June 2020 Galactic News	James Taylor Foundation, BCC2020, Galaxy+SRA, Events, Platforms, ...
8 June 2020	Training Infrastructure Feedback from Marcel Schulz
6 June 2020	UseGalaxy.eu Tool Updates for 2020-06-06
3 June 2020	The ChemicalToolbox: reproducible, user-friendly cheminformatics analysis on the Galaxy platform	cheminformatics.usegalaxy.eu
30 May 2020	UseGalaxy.eu Tool Updates for 2020-05-30
24 May 2020	UseGalaxy.eu Tool Updates for 2020-05-24
15 May 2020	UseGalaxy.eu Tool Updates for 2020-05-15
4 May 2020	May 2020 Galactic News	James Taylor, BCC2020, COVID-19 Response, and more
2 May 2020	UseGalaxy.eu Tool Updates for 2020-05-02
25 April 2020	UseGalaxy.eu Tool Updates for 2020-04-25
23 April 2020	Multi-omics Visualization Platform: An extensible Galaxy plug-in for multi-omics data visualization and exploration	a visualization plug-in that extends Galaxy-P’s advantages into the visualization of large, complex datasets
18 April 2020	UseGalaxy.eu Tool Updates for 2020-04-18
14 April 2020	Integrative meta-omics analysis	Metagenomics, Metatranscriptomics, Metaproteomics
11 April 2020	UseGalaxy.eu Tool Updates for 2020-04-11
4 April 2020	UseGalaxy.eu Tool Updates for 2020-04-04
3 April 2020	James Taylor	1979 - 2020
2 April 2020	Workshop on Workflow Management Systems
28 March 2020	UseGalaxy.eu Tool Updates for 2020-03-28
24 March 2020	ChiRA tool suite - an integrated framework for Chimeric Read Analysis from RNA-RNA interactome data	an integrated framework for Chimeric Read Analysis from RNA-RNA interactome data
24 March 2020	Scientific Infrastructure for Virus Research
21 March 2020	UseGalaxy.eu Tool Updates for 2020-03-21
19 March 2020	WirVsVirus Hackathon	March 20-22
14 March 2020	UseGalaxy.eu Tool Updates for 2020-03-14
11 March 2020	Virtual screening against SARS-CoV-2 main protease	workflows for identifying potential ligands by virtual screening
10 March 2020	UseGalaxy.eu Tool Updates for 2020-03-10
9 March 2020	Storage issues and potential data loss
7 March 2020	UseGalaxy.eu Tool Updates for 2020-03-07
6 March 2020	de.NBI Training Infrastructure Feedback from Helena Rasche	and was wildly successful
1 March 2020	ELIXIR-Italy launches Laniakea@ReCaS, a Galaxy “on-demand” platform
29 February 2020	UseGalaxy.eu Tool Updates for 2020-02-29
28 February 2020	Open collaborative infrastructure to tackle public health emergencies
28 February 2020	Laniakea@ReCaS becomes an EOSC Provider
27 February 2020	TIaaS Calendar and Stats site	Training Infrastructure as a Service
26 February 2020	Coronavirus data analysis by University of Freiburg
25 February 2020	Crowdsourcing citizen science data on usegalaxy.eu
21 February 2020	UseGalaxy.eu Tool Updates for 2020-02-21
19 February 2020	de.NBI Network extended until 2021
17 February 2020	UseGalaxy.eu Tool Updates for 2020-02-17
12 February 2020	12,000 users - 6,900,000 jobs - 13,300,000 datasets
11 February 2020	Exciting progress in the ELIXIR Galaxy community	Towards a European network of Galaxy resources
11 February 2020	New Paper "Gene expression in immortalized versus primary isolated cardiac endothelial cells"
10 February 2020	Training Infrastructure Feedback from Beata Scholtz
8 February 2020	UseGalaxy.eu Tool Updates for 2020-02-08
8 February 2020	CORBEL staff visit program: Integration IDR - Galaxy
7 February 2020	Galaxy provides support as an NFDI
6 February 2020	Accessible and reproducible mass spectrometry imaging data analysis in Galaxy
1 February 2020	UseGalaxy.eu Tool Updates for 2020-02-01
30 January 2020	ELIXIR tools platform meeting and Container SIS meeting in Paris
25 January 2020	UseGalaxy.eu Tool Updates for 2020-01-25
22 January 2020	Outreach - Invited Talk for Introducing Galaxy to Uniklinik Freiburg
20 January 2020	Training Infrastructure Feedback from Denny Popp
18 January 2020	UseGalaxy.eu Tool Updates for 2020-01-18
16 January 2020	Human multi-omics data from UK Personal Genome Project accessible through UseGalaxy.eu
11 January 2020	UseGalaxy.eu Tool Updates for 2020-01-11
8 January 2020	Galaxy Training Survey	We need your input on preparing and giving Galaxy Trainings
8 January 2020	January 2020 Galactic News	Events, Pubs, Blogs, Platforms, Tutorials, Doc, and Happy New Year too
8 January 2020	New Paper "Survey of metaproteomics software tools for functional microbiome analysis"
7 January 2020	Massively Multiplayer Online Science in Galaxy to help Ecologists - A Citizen Science Project
5 January 2020	118 new plant reference genomes and transcriptomes added to Galaxy Europe!
5 January 2020	Laborjournal article about Galaxy
4 January 2020	UseGalaxy.eu Tool Updates for 2020-01-04
28 December 2019	UseGalaxy.eu Tool Updates for 2019-12-28
21 December 2019	UseGalaxy.eu Tool Updates for 2019-12-21
14 December 2019	UseGalaxy.eu Tool Updates for 2019-12-14
10 December 2019	Training Infrastructure Feedback from the Gallantries Project
9 December 2019	December 2019 Galactic News	Events, Pubs, Blogs, Platforms, Tutorials, Doc, Jobs, Releases, and Platypi too.
7 December 2019	UseGalaxy.eu Tool Updates for 2019-12-07
3 December 2019	Training Infrastructure Feedback from Ambre Jousselin
2 December 2019	10,000 users, 6,370,000 jobs and 11,900,000 datasets	A big thank you to all our users and people that have contributed to this project!
1 December 2019	Training Infrastructure Feedback from Giovanni Widmer
30 November 2019	UseGalaxy.eu Tool Updates for 2019-11-30
30 November 2019	GraphClust2: Annotation and discovery of structured RNAs with scalable and accessible integrative clustering
30 November 2019	The de.NBI / ELIXIR-DE training platform - Bioinformatics training in Germany and across Europe within ELIXIR
26 November 2019	PIPE-T paper published
23 November 2019	Enough talking - time to act!
22 November 2019	UseGalaxy.eu Tool Updates for 2019-11-23
20 November 2019	gProfiler is published and running on usegalaxy.eu	A toolset for functional enrichment analysis and conversions of gene lists.
15 November 2019	UseGalaxy.eu Tool Updates for 2019-11-15
12 November 2019	November 2019 Galactic News	Events! Pubs! Platforms! Jobs! Releases!
11 November 2019	SINA available in Galaxy - Accurate high-throughput multiple sequence alignment of ribosomal RNA genes
10 November 2019	UseGalaxy.eu Tool Updates for 2019-11-10
8 November 2019	UseGalaxy – a bioinformatic shopping mall from Sivakumar Prakash
7 November 2019	RNA-Seq Training feedback from Simon Moxon
2 November 2019	Training update from Tomas Klingström	Agricultural Sciences collaboration between Swedish University of Agricultural sciences researchers and the Agricultural Research Council in South Africa
23 October 2019	Use the power of pandas / numpy to transform tabular datasets in a myriad of ways with our new Table Compute tool	Drop or duplicate given rows or columns from a tabular dataset, filter rows or columns on their properties, replace or transform table elements, ...
19 October 2019	UseGalaxy.eu Tool Updates for 2019-10-19
18 October 2019	Parent instance error
17 October 2019	UseGalaxy.eu Tool Updates for 2019-10-17
15 October 2019	Training Infrastructure Feedback from Charles Girardot
12 October 2019	UseGalaxy.eu Tool Updates for 2019-10-12
5 October 2019	UseGalaxy.eu Tool Updates for 2019-10-05
2 October 2019	October 2019 Galactic News	Events! Pubs! Platforms! Jobs! Doc! Tutorials! And some other news too.
2 October 2019	UseGalaxy.eu Upgrading to 19.09
30 September 2019	Another successful Galaxy high-throughput data analysis workshop in Freiburg
29 September 2019	UseGalaxy.eu Tool Updates for 2019-09-29
21 September 2019	UseGalaxy.eu Tool Updates for 2019-09-21
19 September 2019	We are striking!
17 September 2019	8,000 users, 6,000,000 jobs and 11,000,000 datasets
16 September 2019	Scientists must act on our own warnings to humanity
15 September 2019	The European Galaxy server is part of the EOSC marketplace
14 September 2019	UseGalaxy.eu Tool Updates for 2019-09-14
7 September 2019	UseGalaxy.eu Tool Updates for 2019-09-07
6 September 2019	First ATACseq training material!
31 August 2019	UseGalaxy.eu Tool Updates for 2019-08-31
30 August 2019	September 2019 Galactic News	Events! Pubs! Platforms! Jobs! Doc! Tutorials! Releases! And some other news too.
28 August 2019	TIaaS Queue Status Update
24 August 2019	UseGalaxy.eu Tool Updates for 2019-08-24
20 August 2019	PathwayMatcher published and running on usegalaxy.eu
18 August 2019	UseGalaxy.eu Tool Updates for 2019-08-18
17 August 2019	Slamdunk - SLAMseq analysis for nucleotide-conversion sequencing datasets	SLAMseq analysis for nucleotide-conversion sequencing datasets
10 August 2019	UseGalaxy.eu Tool Updates for 2019-08-10
6 August 2019	Galaxy Community Conference - a brief summary!	A brief summary
5 August 2019	The Galaxy Genome Annotation Project - Scaling Genome Annotation for the Masses	Scaling Genome Annotation for the Masses
3 August 2019	UseGalaxy.eu Tool Updates for 2019-08-03
2 August 2019	MaxQuant goes Galaxy
1 August 2019	August 2019 Galactic News	GCC2019 is done; BCC2020 is coming
27 July 2019	UseGalaxy.eu Tool Updates for 2019-07-27
22 July 2019	The European Galaxy Team with talks at ISMB/ECCB
20 July 2019	7,000 users and 10,000,000 datasets
19 July 2019	UseGalaxy.eu Tool Updates for 2019-07-19
13 July 2019	UseGalaxy.eu Tool Updates for 2019-07-13
6 July 2019	UseGalaxy.eu Tool Updates for 2019-07-06
30 June 2019	GCC2019 will be livestreamed
28 June 2019	July 2019 Galactic News	GCC2019 is here! (And other new stuff too)
27 June 2019	Tool Recommendation: What do I do next?	usegalaxy.eu has implemented tool recommendation, finally answering the question "what to do next."
27 June 2019	UseGalaxy.eu Tool Updates for 2019-06-27
21 June 2019	UseGalaxy.eu Tool Updates for 2019-06-21	usegalaxy.eu is getting ready for GCC 2019
17 June 2019	TIaaS Queue Status	using UseGalaxy.eu’s Training infrastructure as a Service (TIaaS).
15 June 2019	UseGalaxy.eu Tool Updates for 2019-06-15
13 June 2019	Native support for Elixir-AAI in Galaxy v.19.05	the European Galaxy Server hosted by Elixir Germany is now ready to accept logins from users using their Elixir AAI identity for authentication..
10 June 2019	Training Infrastructure Feedback from Nevena Veljkovic
8 June 2019	UseGalaxy.eu Tool Updates for 2019-06-08
6 June 2019	UseGalaxy.eu Tool Updates for 2019-06-06
6 June 2019	UseGalaxy.eu update to 19.05
3 June 2019	June 2019 Galactic News	GCC2019 registration / Poster/Demo abstracts / sponsors, GTN CoFest, Platforms, Pubs, Jobs, Blog!, Training, Tools, Releases and more!
24 May 2019	Queue changes during GCC
20 May 2019	Another successful Galaxy workshop in Melbourne
10 May 2019	Galaxy Workshop registration open!
10 May 2019	New Paper "The RNA workbench 2.0: next generation RNA data analysis"
6 May 2019	May 2019 Galactic News	GCC2019 registration / Poster/Demo abstracts / sponsors, GTN CoFest, Platforms, Pubs, Jobs, Blog!, Training, Tools, Releases and more!
26 April 2019	A successful tool and training workshop for the ELIXIR Galaxy Community at Roscoff
24 April 2019	GCC registration is open and abstracts can be submitted until Friday
23 April 2019	UseGalaxy.eu Tool Updates for 2019-04-23
23 April 2019	Visit from Macromolecular Crystallography Group (Diamond Synchrotron)
14 April 2019	FASTQC jobs and very long reads
6 April 2019	UseGalaxy.eu Tool Updates for 2019-04-06
4 April 2019	BeerDEcoded: 1st public workshop
3 April 2019	April 2019 Galactic News	GCC2019 registration and abstract submission, Platforms, Pubs, Jobs, Blog!, Training, Tools, Releases and more!
3 April 2019	We passed the 5,000,000th job and 5,000 users!
24 March 2019	Convert mass spectrometry data file formats with msconvert
20 March 2019	New Paper "Insight into the genome and brackish water adaptation strategies of toxic and bloom-forming Baltic Sea Dolichospermum sp. UHCC 0315"
19 March 2019	UseGalaxy.eu update to 19.01
18 March 2019	UseGalaxy.eu Downtime on 18th March
15 March 2019	New Paper "Biomolecular Reaction and Interaction Dynamics Global Environment (BRIDGE)
14 March 2019	New Paper "The Chimera and the Cyborg"
4 March 2019	March 2019 Galactic News	GalaxyAdmins, GCC2019 Childcare sponsors, Platforms, Pubs, Jobs, Blog!, Training, Tools, Releases and more!
4 March 2019	A(nother) successful Galaxy HTS data analysis workshop in Freiburg
21 February 2019	Empowering the annotation and discovery of structured RNAs with scalable and accessible integrative clustering
15 February 2019	We are now part of the BioDATEN project!
11 February 2019	New Paper "Impact of angiogenic activation and inhibition on miRNA profiles of human retinal endothelial cells"
11 February 2019	New Paper "Pou5f3, SoxB1, and Nanog remodel chromatin on High Nucleosome Affinity Regions at Zygotic Genome Activation"
9 February 2019	Tool Quest: Do you know the answer?
27 January 2019	Vote for the Training during the next Galaxy Community Conference
26 January 2019	Learn how the NASA uses Galaxy!
25 January 2019	Galaxy enhances Introduction to Genomics as part of Master program in Belgrade, by Nevena Veljkovic
25 January 2019	The GOEnrichment tool and tutorial are now available on Galaxy, by Daniel Sobral
19 January 2019	A successful Galaxy RNA-seq workshop in Belgrade
18 January 2019	Queue cleared
11 January 2019	Another European CVMFS mirror is online
10 January 2019	The European Galaxy Team has open positions!
10 January 2019	Galaxy HTS Workshop 25.2.-1.3.2019 - fully booked
8 January 2019	New hardware: 8 x 1 TB memory nodes
31 December 2018	New tutorial: Visualization of RNA-Seq results with Volcano Plot
25 December 2018	Gajan Kristnaskon kaj bonan novjaron!
19 December 2018	Automatic resubmission of failed Galaxy jobs
11 December 2018	UseGalaxy.eu update to 18.09
1 December 2018	Nominate a training for the 2019 Galaxy Community Conference (GCC2019)
30 November 2018	BeerDEcoded: unofficial kickoff
26 November 2018	European Galaxy Days
23 November 2018	ELIXIR Biohackathon in Paris
21 November 2018	Automatic workflow testing
7 November 2018	Upcoming Server Migration
5 November 2018	New Paper "Uncontrolled Diabetes Mellitus Has No Major Influence on the Platelet Transcriptome"
1 November 2018	Enthusiastic Response to the First ELIXIR-NL Galaxy Training Course in the Netherlands
31 October 2018	Training Infrastructure Feedback from Maria Doyle
30 October 2018	New Article 'Selbst ist der Forscher: Big-Data-Analysen leicht gemacht'
17 October 2018	Heinz tools for network analysis over transcriptomics datasets
10 October 2018	New Article 'Datenanalyse mit dem Galaxy Server'
10 October 2018	New Paper "Endothelial cell mineralocorticoid receptors oppose VEGF-induced gene expression and angiogenesis"
10 October 2018	HiC Workshop for INDEPTH in Lucerne
8 October 2018	Initial release of 'gxadmin' tool
5 October 2018	Successful Galaxy Proteomics workshop in Prague
26 September 2018	Cloud Migration Postmortem
25 September 2018	Galaxy and ... Bioconda, CLIP Explorer and RNA workbench @ GCB 2018
24 September 2018	A successful Galaxy HTS data analysis workshop
21 September 2018	UseGalaxy.eu Downtime
1 September 2018	Galaxy on de.NBI cloud now with more power
25 July 2018	Freiburg Galaxy Team has an open position!
18 July 2018	GCCBOSC
12 July 2018	Temporarily Held Workflow Invocations
4 July 2018	Galaxy HiCExplorer: a web server for reproducible Hi-C data analysis, quality control and visualization
4 July 2018	Bioconda: sustainable and comprehensive software distribution for the life sciences
3 July 2018	Tool Usage Graphs
3 July 2018	New Paper "The Transcription Factor ETV1 Induces Atrial Remodeling and Arrhythmia."
18 June 2018	Database outage affecting UseGalaxy.eu
6 June 2018	Data Carpentry workshop and CarpentryCon
5 June 2018	Workshop for Galaxy training material and skills improvement
4 June 2018	Temporary Quota Issue
30 May 2018	New Paper "Nanopolish tools for signal-level analysis of Oxford Nanopore sequencing data is now available in Galaxy"
28 May 2018	New Paper "The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update
25 May 2018	UseGalaxy.eu update to 18.05 and GDPR
7 May 2018	In memory of Christophe Caron
3 May 2018	Nanopolish tools for signal-level analysis of Oxford Nanopore sequencing data is now available in Galaxy
26 April 2018	DNS outage affecting UseGalaxy.eu
24 April 2018	Fileserver Outage affecting Jobs
23 April 2018	New Galaxy Team member!
18 April 2018	Galaxy Workshop registration open!
11 April 2018	Galaxy Africa
16 March 2018	Galaxy User Conference: second and last day
15 March 2018	Freiburg Galaxy becomes useGalaxy.eu
15 March 2018	Galaxy User Conference: a successful first day
14 March 2018	Updated PhageTerm
14 March 2018	ELIXIR Galaxy community kick-off meeting
9 March 2018	Propagating hashtags in a Galaxy history
8 March 2018	Map and identify phenotypic mutations in model organism genomes
6 March 2018	New paper "Reproducible proteomics sample preparation for single FFPE tissue slices using acid-labile surfactant and direct trypsinization"
3 March 2018	deepTools3 is now available!
13 February 2018	Program for the Galaxy User Conference
13 February 2018	ELIXIR Galaxy kick-off meeting 14.03.2018 in Freiburg
11 February 2018	Genome Annotation Reloaded
1 February 2018	New Paper "Disseminating Metaproteomic Informatics Capabilities and Knowledge Using the Galaxy-P Framework"
30 January 2018	New Paper "Distinct epigenetic programs regulate cardiac myocyte development and disease in the human heart in vivo"
30 January 2018	We are now part of COST (CA16212)!
26 January 2018	Updated Salmonella CRISPR Typing
26 January 2018	Next Galaxy Workshop on HTS data analysis in September 2018
18 January 2018	Freiburg Galaxy Team has open positions!
18 January 2018	Galaxy Workshop - Registration is closed!
17 January 2018	ASaiM - an environment to analyze intestinal microbiota data
16 January 2018	New Paper "High-resolution TADs reveal DNA sequences underlying genome organization in flies"
13 January 2018	New Paper "Combinatorial omics analysis reveals perturbed lysosomal homeostasis in collagen VII-deficient keratinocytes"
12 January 2018	ELIXIR Galxy Admin workshop in Oslo.
30 December 2017	HiCExplorer - a suite of tools for reproducible Hi-C data analysis, quality control and visualization
30 December 2017	GraphClust - Scalable clustering and annotation of structured and functional RNAs in an accessible and interactive fashion
11 December 2017	Post Mortem: 2h Tool Execution Outage
10 December 2017	Bioinformatic training with the B3Africa project
30 November 2017	Our paper about the Galaxy Training material and community as a preprint on bioRXiv
30 November 2017	Updated multiqc
28 November 2017	New Paper "Sex differences in peripheral not central immune responses to paininducing injury"
24 November 2017	Updated small_rna_maps
24 November 2017	Updated Small RNA Signatures
24 November 2017	Updated Generate readmap and histograms from alignment files from sRbowtie aligment
23 November 2017	Updated DESeq2
22 November 2017	DNA methylation signatures follow preformed chromatin compartments in cardiac myocytes
21 November 2017	Post Mortem: Upload and various tool failures
17 November 2017	Updated Get flanks
17 November 2017	Registration open for Galaxy HTS data analysis workshop 26.02.-02.03.2018
17 November 2017	Updated Fetch closest non-overlapping feature
16 November 2017	Updated Merge
16 November 2017	Updated Join
16 November 2017	Updated Subtract
16 November 2017	Updated Coverage
16 November 2017	Updated Intersect
16 November 2017	Updated Complement
16 November 2017	Updated Concatenate
16 November 2017	Updated Cluster
16 November 2017	Updated Base Coverage
15 November 2017	Successful Server Hardware Improvements
10 November 2017	Updated Salmonella CRISPR Typing
9 November 2017	Updated FASTQ to FASTA
8 November 2017	Galaxy 17.09 released!
8 November 2017	Updated Trinity
8 November 2017	90+ tools updated
8 November 2017	Updated Annotate smRNA dataset
7 November 2017	Workshop on Provisioning of Virtual Research Environments and Data Management
4 November 2017	Minimap2 mapper for noisy long read sequences (e.g. Nanopore, PacBio)
2 November 2017	First imaging mass spectrometry added
27 October 2017	Updated Filter sequences by length
27 October 2017	Updated Pick Fasta sequences
25 October 2017	Latest version of MultiQC
24 October 2017	Updated Normalize By Median
24 October 2017	Talk @ 5th early-stage researchers Next-Generation Sequencing Symposium
23 October 2017	Galaxy Training infrastructure @ de.NBI Symposium
21 October 2017	Our paper about BioConda on bioRxiv
20 October 2017	Updated NCBI blast suite
19 October 2017	Helping at the Software Carpentry workshop @ EMBL Heidelberg and Talk @ de.NBIer
19 October 2017	Updated sR_bowtie
17 October 2017	Updated cap3
17 October 2017	MetaboFlow meeting (training and hackathon)
14 October 2017	Updated Get Fasta from BioMAJ
13 October 2017	Updated Parse blast output and compile hits
13 October 2017	Updated Oases_optimiser
13 October 2017	Updated Retrieve FASTA from NCBI
13 October 2017	Updated fasta - tabular
13 October 2017	Updated Clip adapter
13 October 2017	Updated blast_to_scaffold
11 October 2017	Our paper "Practical computational reproducibility in the life sciences" on bioRXiv
10 October 2017	BioContainer Hackathon
29 September 2017	VGCN: Rolling Replacement of Cloud Compute Resources
29 September 2017	deNBI Summer School - Computational genomics and RNA biology
28 September 2017	FIXED: upload jobs not scheduled
28 September 2017	Updated pindel2vcf
27 September 2017	Updated pindel
26 September 2017	New Paper "Mitochondrial mutations in human cancer: Curation of translation"
26 September 2017	Updated growthpread
22 September 2017	End of our 5-day HTS Galaxy workshop in Freiburg, Germany
20 September 2017	3 Galaxy related posters @ GCB 2017
14 September 2017	We passed the 2.000.000th job!
31 August 2017	Fixed: Galaxy Metadata Issue
31 August 2017	Search and get data from ENA with ENASearch
2 August 2017	STAR: Ultrafast alignment of RNA-seq data
23 July 2017	Talks, poster and training @ ISMB and BOSC
2 July 2017	W4M: Workflow4Metabolomics 3.0
30 June 2017	Galaxy Community Conference (GCC)
16 June 2017	Updated macs2
10 May 2017	Updated dsrc
28 April 2017	Updated IGblast
16 March 2017	Updated STAR
16 March 2017	Updated featureCounts
1 March 2017	Updated Booster
20 February 2017	Updated xxr
20 February 2017	Updated elp
15 February 2017	Updated breseq
13 February 2017	Updated phageterm
7 February 2017	Updated capsuleFinder
26 January 2017	Updated conjdb
24 January 2017	Updated TXSSCAN
23 January 2017	Updated parsesnp
1 January 2017	Updated blast2myDB