Galaxy is an open-source platform for FAIR data analysis that enables users to:

  • use tools from various domains (that can be plugged into workflows) through its graphical web interface.
  • run code in interactive environments (RStudio, Jupyter...) along with other tools or workflows.
  • manage data by sharing and publishing results, workflows, and visualizations.
  • ensure reproducibility by capturing the necessary information to repeat and understand data analyses.

The Galaxy Community is actively involved in helping the ecosystem improve and sharing scientific discoveries.

The French Galaxy server

The French Galaxy server UseGalaxy.fr is maintained by IFB NNCR Cluster Task force. Please check our Terms of Use and data retention police before using the server. We offer thousands of tools, increased quota on temporary basis, and compute infrastructure for trainers through Training Infrastructure as a Service (TIaaS).

The following regional platforms, members of IFB, are involved in the maintenance and development of UseGalaxy.fr:

Contact

Ask for help, tools, or temporary increase of quota on our support forum

qsupport



Contact support

Training

If you are organising a training session, you can book computing resources using the TIaaS system

training

TIaaS request

GalaxyCat

Can't find a tool on usegalaxy.fr? Why not search on the IFB Galaxy Catalog ?

GalaxyCat



Browse GalaxyCat

Citation

Have you used the French Galaxy server for your data analysis?



citation

Cite the server

Team

The French Galaxy team is distributed across different cities in France.



team

Meet the team

Communities: domain-centric Galaxy subdomains

Workflow4Metabolomics

Data processing, analysis and annotation for the metabolomics community

Workflow4Metabolomics

Workflow4Metabolomics

ProteoRE

Functional analysis and exploration of proteomics and transcriptomics data in biomedical research

ProteORE


ProteoRE

Covid19

Variant analysis, consensus using communuty approuved workflows and datasets

Covid19


Covid19

Metabarcoding

With the following tools and pipelines : FROGS, Qiime, Mothur, Obitools, DADA2, PICRUSt

Metabarcoding


Metabarcoding

Met4J

Open-source Java library dedicated to the structural analysis of metabolic networks

met4j


Met4j

MNHN

Tools from the French Muséum National d'Histoire Naturelle

MNHN


MNHN

News

Galaxy Release 24.1

See what's new on Galaxy with the 24.1 release notes!

The 2024 Galaxy Community Update Paper is Here!

Discover the latest advancements and future directions of the Galaxy Project in the community's newly published 2024 update paper.

Galaxy in Research: Decoding chromatin interactions with asteRIa

Find out how Galaxy helps researchers unlock the mysteries of gene expression regulation through chromatin studies.

Galaxy in Research: Investigating Food Safety Threats

Learn how Galaxy can be used to detect and analyze drug-resistant bacteria threatening food safety in Egypt.

All GTN training data are now automatically mirrored via Onedata

As part of the EuroScienceGateway and in cooperation with Onedata and EGI we are providing all GTN training data on a publicly accessible cloud storage

Events

Jun 24 - Jun 292024 Galaxy Community Conference (GCC2024)

The annual gathering of the Galaxy Community with opportunities to hear latest developments, get training, and meet everyone involved.

Jul 22 - Jul 26Workshop on high-throughput sequencing data analysis with Galaxy

This course introduces scientists to the data analysis platform Galaxy. The course is a beginner course; there is no requirement of any programming skills.

Oct 8 - Oct 10Gateways 2024

Help bridge the connection between science and gateways, such as Galaxy.

Oct 21 - Oct 23EOSC Symposium

EOSC Symposium 2024 invites all EOSC projects. It will take place under the patronage of the German Minister for Education and Research Bettina Stark-Watzinger. The event is being organised by the EOSC Association, the EOSC-A German Mandated Organisation, NFDI, the ZBW – Leibniz Information Centre for Economics, an EOSC-A Member, and with the support of the Horizon Europe project EOSC Focus. The Galaxy Project will join as core pillar of the EU-funded EOSC EuroScienceGateway project.

Nov 13 - Nov 16Biological Data Science

The scope of this meeting will be the infrastructure, software, and algorithms needed to analyze large data sets in biological research.