Galaxy at ISMB/ECCB, BOSC, and MS SIG 2013
Galaxy had a significant presence at ISMB/ECCB, BOSC 2013, and MS SIG 2013. This page lists all known Galaxy related events and presentations. If you have something that isn't listed, please add it below (or send it to [Galaxy Outreach](mailto:outreach AT galaxyproject DOT org)).
| Date | Event | Time | Title & Presenter | Links |
|---|---|---|---|---|
| 19 July | Mass Spectrometry SIG (MS-SIG) | 11:30-11:45 | Innovative, Reproducible MS-based Proteomic Informatics in the Cloud for Emerging Applications with Galaxy-P and CloudBioLinux, John Chilton | Prezi |
| BOSC | 14:00-14:25 | Refinery Platform - Integrating Visualization and Analysis of Large-Scale Biological Data, Nils Gehlenborg | Slides | |
| 20 July | BOSC | 10-45-11:10 | BioBlend - Enabling Pipeline Dreams, Enis Afgan | Slides |
| 11:50-12:05 | Reproducible Quantitative Transcriptome Analysis with Oqtans, Vipin T. Sreedharan | Slides, Video, Poster | ||
| 13:30-13:45 | Towards Enabling Big Data and Federated Computing in the Cloud, Enis Afgan | Slides | ||
| 14:00-14:15 | An update on the Seal Hadoop-based sequence processing toolbox, Luca Pireddu | Slides, Video | ||
| 14:15-14:30 | Open Source Configuration of Bioinformatics Infrastructure, John Chilton | Prezi, Slides, Video | ||
| 16:00-16:25 | Community development of human variant calling and validation pipelines, Brad Chapman | Slides, Video | ||
| 16:25-16:40 | Understanding Cancer Genomes Using Galaxy, Jeremy Goecks This will also be presented as poster 19. |
Slides, Graphic, Video | ||
| 21 July | ISMB/ECCB Technology Track | 14:10-14:35 | TT09: Understanding Cancer Genomes Using Galaxy, Jeremy Goecks | Slides |
| 22 July | ISMB/ECCB Workshop | 11:30-11:55 | Big Data publishing, Scott Edmunds | Slides |
| Odd Poster Session | 12:25-14:10 | B55: Galaxy LIMS for next-generation sequencing, Jelle Scholtalbers | ||
| F57: RNA-Seq Analysis of Eucalyptus Genotypes that Differ in Carbon Allocation, Adhemar Zerlotini | ||||
| H37: GWIS: Online exhaustive bivariate GWAS in minutes, David Rawlinson | Poster | |||
| N047: Clustal Omega, Desmond Higgins | ||||
| O097: An Integrated Systems Biology Platform for Complete Proteogenomic Analysis, John Chilton | Poster | |||
| 23 July | ISMB/ECCB Workshop | 10:30-12:25 | Bioconductor and Galaxy: examples of successful bioinformatics networks, Wolfgang Huber and Jeremy Goecks; part of The “How To Guide” for Establishing a Successful Bioinformatics Network | Slides |
| Even Poster Session | 12:25-14:10 | A66: GRANATUM-LiSIs: Making complex in silico predictive models accessible to wet biologists, Ioannis Kirmitzoglou | Poster | |
| B26: GenomeSpace: An environment for frictionless bioinformatics, Michael Reich | Poster, Graphic | |||
| B60: Tools for the correction, analysis and visualization of next generation sequencing data, Fidel Ramírez | Poster | |||
| B62: Medilaxy: A Galaxy Platform For Medical Image Analysis, Marco Carnini | Poster | |||
| ISMB/ECCB Workshop | 14:10-16:05 | Integrated Visualization and Computing for Biomedical Research, Nils Gehlenborg, Jeremy Goecks |
Meeting Reports
- "At ISMB '13, BOSC Talks Underscore Value of Open Source Infrastructure, Data for Scientific Research," by Uduak Grace Thomas, GenomeWeb
- "Bioinformaticians breaking down barriers in Berlin," by Scott Edmunds, GigaScience