How to use Galaxy

How to cite Galaxy

Citing Galaxy

If you use Galaxy@Pasteur please cite doi:10.7490/f1000research.1114334.1

Cluster Load

test

For pasteur users:

  • Instructions on how to import big data here.
  • Galaxy Initiation slides are available here.
  • If you need a new tool or a new genome index for an existing tool (bwa, blast, star...), send an email to Pasteur_galaxy_support.

Warning! When xml are updated, workflows using them must be adapted.

News

We are striking!

usegalaxy.eu closes job-queue on February 14th to support climate strike

SPOC HDR UK ELIXIR-UK CoFest 2025: How did it go?

We held our second 🖖🏾SPOC CoFest, in the great tradition of the excellent CoFests organised in the GTN that welcomed @gtn:nomadscientist and many others into the community.

CellxGene-VIP scRNA-seq, spatial transcriptomics, and multiome data visualization

CELLxGENE-VIP is a frontend plugin of CELLxGENE, enabling users to generate multiple QC plots in high-resolution SVG or PNG format. It can also visualize spatial transcriptomics and 10X multiome.

TabPFN: Foundation Model for Tabular Data in Galaxy

Fast machine learning method for making predictions on any tabular data

Galaxy Release 24.2

Check out the newest features and updates on Galaxy!

Events

Feb 27Research Data Management with RSpace and Galaxy - Talk and Q&A

Discover how RSpace's open-source solutions promote innovation and collaboration in research data management (RDM).

Mar 10 - Mar 14Workshop on high-throughput sequencing data analysis with Galaxy

This course introduces scientists to the data analysis platform Galaxy. The course is a beginner course; there is no requirement of any programming skills.

Mar 12 - Mar 14E-Science-Tage 2025

The E-Science-Tage is an interdisciplinary conference series on research data management and open science. The Freiburg Galaxy team will present a poster on Galaxy's applicability in the humanities and offer a workshop.