How to use Galaxy

How to cite Galaxy

Citing Galaxy

If you use Galaxy@Pasteur please cite doi:10.7490/f1000research.1114334.1

Cluster Load

test

For pasteur users:

  • Instructions on how to import big data here.
  • Galaxy Initiation slides are available here.
  • If you need a new tool or a new genome index for an existing tool (bwa, blast, star...), send an email to Pasteur_galaxy_support.

Warning! When xml are updated, workflows using them must be adapted.

News

Quantifying Electrophoresis Gel Bands with QuPath and Galaxy

Gel Electrophoresis is a staple of molecular biology, providing a way to separate DNA, RNA, or proteins by size and charge

Accessing multimessenger TAP server

A new new IVOA-compliant TAP server, currently exposing data from the INTEGRAl mission, is now directly accessible from Galaxy.

Exploring Genomics with Galaxy: A Six-Week Internship Journey

My internship experience with assembling genomes and annotating them during a 6 week internship

July 2025 Galaxy Newsletter

From cutting-edge research to international conferences, Galaxy continues to grow. Get all the updates in this quarter's newsletter!

Galaxy at JOBIM

The JOBIM conference, the annual event of the French bioinformatics and biostatistic community, brought together researchers, educators, and innovators in bioinformatics to discuss cutting-edge tools, workflows, and collaborative efforts. Among the highlights of this year's event was the significant presence of Galaxy. This blog post explores the key contributions, presentations, and innovations centered around Galaxy at JOBIM 2025.

Events

Sep 3 - Sep 5AnVIL Community Conference 2025

Connect with the AnVIL community this September in Nashville to explore cloud-powered genomics.

Sep 4Single-cell & sPatial Omics Community Meeting: 🖖🏾SPOC

Sep 9Galaxy Community Board Meeting: 🪑GCB

Sep 16The European Galaxy team at Postdoc Appreciation Week Germany 2025 (Online event)

Discover how the Galaxy Platform is making data analysis accessible to researchers from all backgrounds. Join a live demo and explore real-world use cases at our webinar during the Postdoc Appreciation Week 2025.

Sep 17Galaxy: The Open Source Platform as an entry point to Digital Humanities and Research Data Management

Are you new to digital history? Do you want to learn ways to analyse your sources with digital tools from your browser without any programming skills? Do you want to get an idea of research data management? Register for our course at the Historikertag 2025 in Bonn to find out more