How to use Galaxy

How to cite Galaxy

Citing Galaxy

If you use Galaxy@Pasteur please cite doi:10.7490/f1000research.1114334.1

Cluster Load

test

For pasteur users:

  • Instructions on how to import big data here.
  • Galaxy Initiation slides are available here.
  • If you need a new tool or a new genome index for an existing tool (bwa, blast, star...), send an email to Pasteur_galaxy_support.

Warning! When xml are updated, workflows using them must be adapted.

News

New Interactive Tools Panel in Galaxy 25.0

New panel allocated for interactive tools on Galaxy

🔬 QuPath-Galaxy: Bringing digital pathology image analysis to your browser.

Explore whole slide images and run powerful tissue analysis directly in your browser with the QuPath-Galaxy interactive tool.

RSpace is now integrated with Galaxy

Analyze data with Galaxy, keep it under control on RSpace

Freiburg Galaxy team at the EGI 2025

From June 03rd to 6th, members from the Freiburg Galaxy team travelled to Santander, Spain to participate and present the EuroScienceGateway (ESG) project at the EGI2025 meeting

The Galaxy 25.0 Release is Live!

The latest Galaxy release is here and is packed with enhanced collection capabilities, streamlined workflow management, interactive tools and visualizations improvements, and new integrations to accelerate your research.

Events

Jun 23 - Jun 26Galaxy and Bioconductor Community Conference

Get ready for the first-ever Galaxy and Bioconductor Community Conference (GBCC 2025)! Join us in New York for an unforgettable event packed with cutting-edge bioinformatics workshops, inspiring keynotes, and amazing networking opportunities.

Jun 30 - Jul 4From Data to Discovery: Metagenomics, RNA-Seq - NGS Bioinformatics with Galaxy

This course introduces scientists to the data analysis platform Galaxy

Jul 8 - Jul 9The first Galaxy Tool Development Workshop in Freiburg, Germany

Learn to build and publish Galaxy tools in our first hands-on workshop in Freiburg.