UseGalaxy.eu Tool Updates for 2020-09-12
On 2020-09-12, the tools on UseGalaxy.eu were updated by our automated tool update and installation process in Jenkins Build #232
hca_sc_get-scrna
- retrieve_scxa was updated to 72b6e1747e37
Assembly
- megahit was updated to 7518ee87b53d
Proteomics
- openms_assaygeneratormetabo was updated to cb9d2162b340
- openms_clustermasstracesbyprecursor was updated to f0682a468daa
- openms_myrimatchadapter was updated to d9512d2a688c
- openms_novoradapter was updated to 562d46a2f8b6
- openms_nucleicacidsearchengine was updated to fe6eddc2e756
- openms_openpepxl was updated to a2a842b00f9c
- openms_percolatoradapter was updated to e7881a82b56d
- openms_xfdr was updated to 81402a5e4173
- openms_accuratemasssearch was updated to 40e0709178a5
- openms_clustermasstraces was updated to 8fad84d1a74d
- openms_cometadapter was updated to 2ffc94cb0766
- openms_compnovo was updated to 77d92924bb5a
- openms_compnovocid was updated to ea09480c5d8f
- openms_consensusmapnormalizer was updated to 9ff14d340f84
- openms_cruxadapter was updated to a8dd6f1257ab
- openms_cvinspector was updated to 3b585b370ab8
- openms_databasefilter was updated to d589c931720d
- openms_decharger was updated to 95bf997c9cf5
- openms_decoydatabase was updated to 622bb8ee4942
- openms_demeanderize was updated to 37caa89b3ab1
- openms_digestor was updated to 7af5860ae563
- openms_dtaextractor was updated to e31fe5424cbe
- openms_eicextractor was updated to 2bd3c83eed94
- openms_epifany was updated to 03e13b23a78b
- openms_externalcalibration was updated to 4f6a44916c89
- openms_falsediscoveryrate was updated to 100359fb8e7c
- openms_featurefindercentroided was updated to 6eda2adf7613
- openms_featurefinderidentification was updated to c1beeebc9db7
- openms_featurefinderisotopewavelet was updated to becf3642c634
- openms_featurefindermetabo was updated to 21dc135961b5
- openms_featurefindermetaboident was updated to 539b683e9752
- openms_featurefindermultiplex was updated to 3098bea02bd8
- openms_featurefindersuperhirn was updated to c42075bb5123
- openms_featurelinkerlabeled was updated to fc56e75d8b14
- openms_featurelinkerunlabeled was updated to 6b88274392ce
- openms_featurelinkerunlabeledkd was updated to 2570414d1fd9
- openms_featurelinkerunlabeledqt was updated to bd07412009d1
- openms_ffeval was updated to 12513e823fd0
- openms_fidoadapter was updated to b552ec8456e7
- openms_fileconverter was updated to f2388622d581
- openms_filefilter was updated to acf2b5b25c75
- openms_fileinfo was updated to 98f171dab07c
- openms_gnpsexport was updated to 22885d201eb8
- openms_highresprecursormasscorrector was updated to 8962ca0b2456
- openms_idconflictresolver was updated to 79a706245fd3
- openms_idextractor was updated to d1d410b94443
- openms_idfileconverter was updated to 43a1db77b7a6
- openms_idfilter was updated to a050a685eea1
- openms_idmapper was updated to 138a734e21a1
- openms_idmassaccuracy was updated to 65be0674bb70
- openms_idmerger was updated to 64dbb1eb0048
- openms_idposteriorerrorprobability was updated to 18ee86db4af2
- openms_idripper was updated to b50cc9d1d1a9
- openms_idrtcalibration was updated to 8bd1fe67a9b1
- openms_idscoreswitcher was updated to ee6cc162893a
- openms_idsplitter was updated to 629b818f162c
- openms_internalcalibration was updated to 4682dcff7e2f
- openms_isobaricanalyzer was updated to d52e76ea2c11
- openms_labeledeval was updated to 6af4a3054890
- openms_lowmempeakpickerhires was updated to d8a68a6dec7b
- openms_lowmempeakpickerhiresrandomaccess was updated to 4cfd0b909d6e
- openms_luciphoradapter was updated to b67078922766
- openms_mapaligneridentification was updated to bf50f9eb1dcb
- openms_mapalignerposeclustering was updated to e237cb433a92
- openms_mapalignerspectrum was updated to b5b03aacbfd9
- openms_mapalignertreeguided was updated to 759648882c3c
- openms_mapnormalizer was updated to cd9af291f6d4
- openms_maprttransformer was updated to fd6de4cdb9e9
- openms_mapstatistics was updated to 05215884f6d0
- openms_maraclusteradapter was updated to c1f58afbc706
- openms_mascotadapter was updated to fb751f9c050b
- openms_mascotadapteronline was updated to a90f253da067
- openms_masscalculator was updated to ff18cb79cdd2
- openms_metaboliteadductdecharger was updated to 68e3317532cb
- openms_metabolitespectralmatcher was updated to 7b5df538705e
- openms_metaprosip was updated to 73c1493ac4c2
- openms_mrmmapper was updated to 9a62bfe7661d
- openms_mrmpairfinder was updated to a040e1ed8736
- openms_mrmtransitiongrouppicker was updated to cf352aac62b4
- openms_msfraggeradapter was updated to 52a0856534d9
- openms_mssimulator was updated to 98bb49e7b5ba
- openms_msstatsconverter was updated to 0dcd11bc33f8
- openms_multiplexresolver was updated to 381448b2db6d
- openms_mztabexporter was updated to e270a5689e12
- openms_noisefiltergaussian was updated to 4b6ea1de6dc4
- openms_noisefiltersgolay was updated to f2834f001a80
- openms_omssaadapter was updated to f91e7d51c17f
- openms_openpepxllf was updated to 04168c0bdfa7
- openms_openswathanalyzer was updated to bc57c90ba60f
- openms_openswathassaygenerator was updated to 5848492bfc5a
- openms_openswathchromatogramextractor was updated to e9c148b32f87
- openms_openswathdecoygenerator was updated to 1814187218fe
- openms_openswathfeaturexmltotsv was updated to b8192a9b7f9c
- openms_openswathfilesplitter was updated to 0ab17cc5cf0c
- openms_openswathmzmlfilecacher was updated to e7c43d17e3dc
- openms_openswathrewritetofeaturexml was updated to 175016416031
- openms_openswathrtnormalizer was updated to f25fbb8ff7cf
- openms_openswathworkflow was updated to 3967f7cf35b9
- openms_peakpickerwavelet was updated to bf3353f27d33
- openms_pepnovoadapter was updated to ae0d71611437
- openms_peptideindexer was updated to c4a73c6a8dca
- openms_phosphoscoring was updated to 4c583fde2a28
- openms_precursorionselector was updated to faac17171cc2
- openms_precursormasscorrector was updated to 315dca04e06f
- openms_proteininference was updated to e18096659b38
- openms_proteinresolver was updated to 814d6f4706e3
- openms_psmfeatureextractor was updated to 8d4b175e06b5
- openms_ptmodel was updated to 039029f54c89
- openms_qccalculator was updated to 8bcc0d2ad96e
- openms_qcembedder was updated to 254e748f243a
- openms_qcexporter was updated to 7e8a254ef96d
- openms_qcextractor was updated to ef970936ce43
- openms_qcimporter was updated to ddf8a08bbd91
- openms_qcshrinker was updated to ccfc3e189087
- openms_qualitycontrol was updated to e2f683fcd6bd
- openms_rnadigestor was updated to 3e7d3f64392b
- openms_rnamasscalculator was updated to 4f8478024146
- openms_rnpxlsearch was updated to 7911914e96f6
- openms_rtevaluation was updated to 0cf2a9047a17
- openms_rtmodel was updated to a9ece00a3e54
- openms_seedlistgenerator was updated to bff2e0548994
- openms_semanticvalidator was updated to 702ed84d9f4c
- openms_sequencecoveragecalculator was updated to 01e5bd3ad317
- openms_simplesearchengine was updated to e42e8b553f7d
- openms_siriusadapter was updated to 01731de4b735
- openms_speclibcreator was updated to 70105532a580
- openms_speclibsearcher was updated to 69489bd3426b
- openms_spectrafilterbernnorm was updated to ec9c04b05fa2
- openms_spectrafilternlargest was updated to 05a7ffa3f655
- openms_spectrafilternormalizer was updated to 8904d228594a
- openms_spectrafilterparentpeakmower was updated to e60558a87656
- openms_spectrafilterscaler was updated to daae178002c3
- openms_spectrafiltersqrtmower was updated to fb74176ff8f9
- openms_spectrafilterthresholdmower was updated to e9ec21114394
- openms_spectrafilterwindowmower was updated to 45207485f1f1
- openms_spectramerger was updated to bf529c279902
- openms_spectrastsearchadapter was updated to 28e96ae21a44
- openms_svmtheoreticalspectrumgeneratortrainer was updated to 94b81345543d
- openms_targetedfileconverter was updated to 51b9c2d5b4c3
- openms_ticcalculator was updated to 32667824b653
- openms_tofcalibration was updated to 40a101cabd0e
- openms_transformationevaluation was updated to fc8e5a66639c
- openms_xtandemadapter was updated to 9e16ba5b88e8
- encyclopedia_encyclopedia was updated to d0ea7589e95f
- encyclopedia_fasta_to_prosit_csv was updated to ca7a315fb902
- encyclopedia_library_to_blib was updated to 0202b8f3a516
- encyclopedia_prosit_csv_to_library was updated to 8a9cef108b0c
- encyclopedia_quantify was updated to 4081e4faa4ab
- encyclopedia_searchtolib was updated to 62a718b76f62
- encyclopedia_walnut was updated to ce1a157a41bd
Metagenomic Analysis
- last was updated to bf30030e5265
Get Data
- iedb_api was updated to e95d3221b7f0
- dbbuilder was updated to c1b437242fee
Mapping
- megablast_xml_parser was updated to fbff957a3655
hca_sc_scanpy_tools
- anndata_ops was updated to a4ad76e3dc4a
- scanpy_compute_graph was updated to c78c930e3263
- scanpy_filter_cells was updated to e05cafd4e2b2
- scanpy_filter_genes was updated to 083418c42b90
- scanpy_find_cluster was updated to ed07813a7266
- scanpy_find_markers was updated to fb9bd74c32b0
- scanpy_find_variable_genes was updated to 5663eb6b965c
- scanpy_normalise_data was updated to 7852b823ad45
- scanpy_parameter_iterator was updated to fb354a78d4ae
- scanpy_plot_embed was updated to f8b5478a9fdf
- scanpy_plot_trajectory was updated to 0cb36b79741e
- scanpy_read_10x was updated to 72cf1c8f5870
- scanpy_regress_variable was updated to 63e18d37228d
- scanpy_run_diffmap was updated to 900b3c31fd3a
- scanpy_run_dpt was updated to 730d098a9f23
- scanpy_run_fdg was updated to 885681d258b4
- scanpy_run_paga was updated to f6148c49ff8b
- scanpy_run_pca was updated to f7ce9ed8a4f3
- scanpy_run_tsne was updated to c4a20a57d825
- scanpy_run_umap was updated to 62c31dc2e5d5
- scanpy_scale_data was updated to 29a69127061f
Variant Calling
- vardict_java was updated to 5f756651a1bc
- sniffles was updated to 93c4b04a0769
Data Managers
- data_manager_eggnog_mapper_abspath was updated to 2aec8d30ff42
NCBI Blast
- ncbi_blast_plus was updated to 5edc472ec434
ChemicalToolBox
- biomd_extract_clusters was updated to 078dfd7fb26d
- biomd_neqgamma was updated to 4f3222cb5cf6
- biomd_rmsd_clustering was updated to b001ebc8bf58
- fastpca was updated to 6f2029791c94