Galaxy Freiburg
The homepage of the Freiburg Galaxy community
Galaxy is an open-source platform for FAIR data analysis that enables users to:
- use tools from various domains (that can be plugged into workflows) through its graphical web interface.
- run code in interactive environments (RStudio, Jupyter...) along with other tools or workflows.
- manage data by sharing and publishing results, workflows, and visualizations.
- ensure reproducibility by capturing the necessary information to repeat and understand data analyses.
The Galaxy Community is actively involved in helping the ecosystem improve and sharing scientific discoveries.
News
Exploring Genomics with Galaxy: A Six-Week Internship Journey
My internship experience with assembling genomes and annotating them during a 6 week internship
From cutting-edge research to international conferences, Galaxy continues to grow. Get all the updates in this quarter's newsletter!
The JOBIM conference, the annual event of the French bioinformatics and biostatistic community, brought together researchers, educators, and innovators in bioinformatics to discuss cutting-edge tools, workflows, and collaborative efforts. Among the highlights of this year's event was the significant presence of Galaxy. This blog post explores the key contributions, presentations, and innovations centered around Galaxy at JOBIM 2025.
Galaxy and Bioconductor Community Conference Meeting Report
From groundbreaking research to hands-on workshops and live demos, GBCC2025 showcased the best of the Galaxy and Bioconductor communities.
Freiburg Galaxy Team’s Internal Tool Development Workshop
Know more about the recent Tool Development workshop organized at Freiburg Galaxy Team
Events
Aug 5BRC Measles Bioinformatic Analysis Webinar
Please join the NCBI and the NIAID-funded BRCs to discuss Measles data analysis!
Aug 19 - Aug 212025 NCI Informatics Technology for Cancer Research Annual Meeting
Join the 2025 NCI ITCR Annual Meeting to explore cutting-edge cancer informatics tools and collaborations.
Aug 26 - Aug 28Galaxy @ CoRDI 2025
Do you want to learn how Galaxy can help you with your research and reproducible research data management? Join us at CoRDI!
Our services
The Freiburg Galaxy Team is offering several services to enable reproducible and accessible research for everyone:
Training
We regularly provide workshops.
But we cannot always meet capacity, so we've put all of our training materials online. This has become a community project with people from all over the world contributing training materials.
Topics include: variant analysis, transcriptomics, metagenomics, epigenetics, and many more!
Acknowledgements
We are aiming to maintain high competency and provide high-quality data analysis services to all our Galaxy users.
Therefore, we request that you acknowledge this service by including the members of the Freiburg Galaxy Team as co-authors if they have made a significant intellectual and/or organizational contribution to the work described (conceptualization, design, data analysis, data interpretation and/or input into drafting, revising or writing any portion of the manuscript).
Individuals who have contributed to the project, but whose contributions do not rise to the level justifying authorship, can be recognized in the acknowledgements section of the manuscript as follows:
The authors acknowledge the support of the Freiburg Galaxy Team: Person X and Prof. Rolf Backofen, Bioinformatics, University of Freiburg, Germany funded by Collaborative Research Centre 992 Medical Epigenetics (DFG grant SFB 992/1 2012) and the German Federal Ministry of Education and Research (BMBF grant 031 A538A de.NBI-RBC).
Additional funding of projects and/or provision of material expenses are welcome as well, to help support our growing Galaxy community in Freiburg.