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Galaxy Workshops January 15, 20159:00-11:00: Introductory 1:30- 3:30: Advanced Instructor: Dave Clements Location TBD San Diego State University San Diego, California, United States |
This workshop has been cancelled.
Registration
Registration is free and open to any member of the SDSU community. Space is limited, however, so registering now is highly encouraged.
Audience
Are you a life scientist who needs to do complex analysis on large datasets?
Galaxy is an open, web-based platform for data intensive life science research that enables non-bioinformaticians to create, run, tune, and share their own bioinformatic analyses.
This hands-on workshop will teach participants how to integrate data, and perform simple and complex analysis within Galaxy. It will also cover data visualization and visual analytics, and how to share and reuse your bioinformatic analyses, all from within Galaxy.
No programming or Linux command line experience is required.
Workshops
There will be an introductory workshop in the morning, and an advanced workshop in the afternoon. You can register for either or both workshops.
Introductory Workshop: AM
Prerequisites: None.
| Time | Topic |
|---|---|
| 9:00 | Welcome Introductions and logistics |
| 9:10 | Basic Analysis with Galaxy Walk through a worked, hands-on example demonstrating basic analysis with Galaxy |
| 10:45 | Galaxy Project Overview Introduction to Galaxy and the Galaxy |
| 11:00 | Done |
Advanced Workshop: PM
Prerequisites: Experience with Galaxy, or attendance at the morning workshop.
| 1:00 | Welcome Introductions and logistics |
|---|---|
| 1:40 | Advanced Usage: RNA-Seq Example Walk through a worked, hands-on example demonstrating RNA-Seq analysis with Galaxy |
| 3:30 | Done |
Logistics
The workshops are being held in TBD on the San Diego State University Campus.
Please bring a fully charged, wi-fi enabled laptop with you.
Support
These workshops are generously supported by the Biological & Medical Informatics Research Center at San Diego State University, an AWS in Education grant award, and the National Institutes of Health (NIH).
Slides
Questions?
Contact [Biological & Medical Informatics](mailto:bmi AT mail DOT sdsu DOT edu) or [Galaxy Outreach](mailto:outreach AT galaxyproject DOT org).